Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX11Q96FC9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX11Q96FC9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX11Q96FC9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX11Q96FC9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX11Q96FC9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX11Q96FC9 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX11Q96FC9 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 AC008735.3-201ENST00000596646 500 ntBASIC18.2■□□□□ 0.5
DDX11Q96FC9 AC010319.3-201ENST00000597028 470 ntBASIC18.2■□□□□ 0.5
DDX11Q96FC9 MIR6799-201ENST00000620297 69 ntBASIC18.2■□□□□ 0.5
DDX11Q96FC9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX11Q96FC9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX11Q96FC9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX11Q96FC9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX11Q96FC9 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX11Q96FC9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX11Q96FC9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX11Q96FC9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX11Q96FC9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX11Q96FC9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX11Q96FC9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDX11Q96FC9 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX11Q96FC9 AC007686.3-201ENST00000619017 3487 ntBASIC18.19■□□□□ 0.5
DDX11Q96FC9 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX11Q96FC9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX11Q96FC9 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.19■□□□□ 0.5
DDX11Q96FC9 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDX11Q96FC9 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 RPL13P2-201ENST00000440687 659 ntBASIC18.19■□□□□ 0.5
DDX11Q96FC9 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDX11Q96FC9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX11Q96FC9 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 AL158212.4-201ENST00000624062 1286 ntBASIC18.19■□□□□ 0.5
DDX11Q96FC9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX11Q96FC9 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX11Q96FC9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDX11Q96FC9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDX11Q96FC9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX11Q96FC9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
DDX11Q96FC9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms