Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 CLK3P2-201ENST00000427566 1453 ntBASIC16.2■□□□□ 0.18
TRIM11Q96F44 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.2■□□□□ 0.18
TRIM11Q96F44 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 AL589987.1-201ENST00000453380 819 ntBASIC16.19■□□□□ 0.18
TRIM11Q96F44 FAM86LP-201ENST00000478302 853 ntBASIC16.19■□□□□ 0.18
TRIM11Q96F44 SPDYE18-201ENST00000510091 1050 ntBASIC16.19■□□□□ 0.18
TRIM11Q96F44 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.19■□□□□ 0.18
TRIM11Q96F44 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM11Q96F44 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRIM11Q96F44 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM11Q96F44 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM11Q96F44 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM11Q96F44 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRIM11Q96F44 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.18■□□□□ 0.18
TRIM11Q96F44 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM11Q96F44 AC026410.3-201ENST00000514280 936 ntBASIC16.18■□□□□ 0.18
TRIM11Q96F44 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM11Q96F44 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM11Q96F44 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 AC104794.3-201ENST00000566840 1248 ntBASIC16.18■□□□□ 0.18
TRIM11Q96F44 RRP7BP-205ENST00000566851 833 ntBASIC16.18■□□□□ 0.18
TRIM11Q96F44 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRIM11Q96F44 AC093512.1-201ENST00000617969 520 ntBASIC16.18■□□□□ 0.18
TRIM11Q96F44 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM11Q96F44 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 DRD5P1-201ENST00000456605 1438 ntBASIC16.18■□□□□ 0.18
TRIM11Q96F44 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.18■□□□□ 0.18
TRIM11Q96F44 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM11Q96F44 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRIM11Q96F44 AC093525.8-201ENST00000624099 1342 ntBASIC16.18■□□□□ 0.18
TRIM11Q96F44 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM11Q96F44 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms