Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASKIN1Q8WXD9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASKIN1Q8WXD9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC23.21■■□□□ 1.31
CASKIN1Q8WXD9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASKIN1Q8WXD9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASKIN1Q8WXD9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CASKIN1Q8WXD9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASKIN1Q8WXD9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
CASKIN1Q8WXD9 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
CASKIN1Q8WXD9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.31
CASKIN1Q8WXD9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 AL035414.1-201ENST00000451327 857 ntBASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 AC006453.1-201ENST00000636037 1257 ntBASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CASKIN1Q8WXD9 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 AC018629.1-201ENST00000623381 1736 ntBASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 NAT9-224ENST00000583757 583 ntTSL 3 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CASKIN1Q8WXD9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 RPS2P36-201ENST00000456516 831 ntBASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 CCNC-217ENST00000523985 958 ntTSL 2 BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 RTN3P1-201ENST00000536295 711 ntBASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 STUB1-204ENST00000564370 875 ntTSL 2 BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 IRF3-215ENST00000596822 823 ntTSL 3 BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 AC008894.3-201ENST00000624324 3103 ntBASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASKIN1Q8WXD9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CASKIN1Q8WXD9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CASKIN1Q8WXD9 AC239868.1-201ENST00000369385 493 ntBASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms