Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 AP003680.1-201ENST00000598970 3660 ntBASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 CD8B2-202ENST00000417670 633 ntBASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 AC006033.1-201ENST00000440505 426 ntBASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 RN7SL48P-201ENST00000579283 293 ntBASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 AC084364.1-201ENST00000551967 1556 ntBASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 AC007787.1-201ENST00000588095 1583 ntBASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHKBP1Q8TBC3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 AC099063.4-201ENST00000641099 1602 ntBASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 AL139094.1-201ENST00000405549 1188 ntBASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 AC007969.1-201ENST00000433675 447 ntBASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.02■□□□□ 0.16
SHKBP1Q8TBC3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms