Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 LINC00552-201ENST00000625151 2579 ntBASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 COX5BP8-201ENST00000416911 349 ntBASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 AC134915.1-201ENST00000426461 574 ntBASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 RPL13AP25-201ENST00000484130 612 ntBASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 API5-211ENST00000534695 560 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 AC092552.1-201ENST00000547243 906 ntBASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 AC123567.1-201ENST00000548294 1261 ntBASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 TP53TG3HP-202ENST00000569755 579 ntBASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 AC007686.3-201ENST00000619017 3487 ntBASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 NME2P1-201ENST00000426182 414 ntBASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 AC104596.2-201ENST00000512793 793 ntBASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 AC124283.3-201ENST00000570869 594 ntBASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDH19Q8TAB3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH19Q8TAB3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH19Q8TAB3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH19Q8TAB3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH19Q8TAB3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH19Q8TAB3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH19Q8TAB3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH19Q8TAB3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH19Q8TAB3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.77■□□□□ 0.11
PCDH19Q8TAB3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PCDH19Q8TAB3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH19Q8TAB3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PCDH19Q8TAB3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH19Q8TAB3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH19Q8TAB3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 AC018529.2-202ENST00000611482 3087 ntBASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms