Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 AC140479.7-201ENST00000636301 2332 ntBASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 AC007191.1-201ENST00000623179 2995 ntBASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 AL133267.1-201ENST00000398220 340 ntBASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 AC004449.1-201ENST00000564240 433 ntBASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 AC074044.1-201ENST00000609673 707 ntBASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLHC1Q8NHS4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 MTHFR-210ENST00000641407 2387 ntBASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 KRT18P43-201ENST00000469825 1281 ntBASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 AC027369.6-201ENST00000525520 931 ntBASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 AC044860.1-202ENST00000559481 777 ntBASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLHC1Q8NHS4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms