Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 OR8T1P-201ENST00000421347 918 ntBASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 AL929302.1-201ENST00000426556 871 ntBASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 AC018638.5-201ENST00000450885 754 ntBASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 TREHP1-201ENST00000531328 465 ntBASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 CICP11-201ENST00000434745 2827 ntBASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL22A1Q8NFW1 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 AC008972.2-201ENST00000606587 494 ntBASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 AL109809.1-201ENST00000418979 1367 ntBASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL22A1Q8NFW1 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 AC063952.3-201ENST00000467756 308 ntBASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 RN7SL582P-201ENST00000491078 279 ntBASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 RN7SL564P-201ENST00000496309 250 ntBASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 ALG1L3P-201ENST00000503331 765 ntBASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 NAA40-205ENST00000539656 577 ntTSL 4 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 AC013553.1-201ENST00000560906 267 ntBASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 HELLS-212ENST00000630929 400 ntTSL 5 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 PHB-210ENST00000511832 1509 ntTSL 2 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 TEKT4P2-202ENST00000559466 1312 ntBASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 SERBP1P2-201ENST00000436888 1164 ntBASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 AL451000.1-201ENST00000451300 1186 ntBASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 SCARNA12-201ENST00000459155 270 ntBASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 APOC1-209ENST00000592885 562 ntTSL 3 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms