Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 AC004461.1-201ENST00000412461 403 ntBASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 KRT18P32-201ENST00000424695 1287 ntBASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 AP006288.1-201ENST00000446065 395 ntBASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 AC004967.1-201ENST00000453589 447 ntBASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 SNHG9-202ENST00000564014 471 ntBASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
PIK3C3Q8NEB9 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 AC134684.3-201ENST00000641758 218 ntBASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 MBLAC2-202ENST00000514906 1936 ntBASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 AC087386.2-201ENST00000623212 4637 ntBASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
PIK3C3Q8NEB9 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms