Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 RBPMS2P1-201ENST00000437762 623 ntBASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 AC027307.2-201ENST00000591252 911 ntBASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 AL450472.2-201ENST00000603663 1156 ntBASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 AC005252.3-201ENST00000623855 2258 ntBASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.36□□□□□ -0.11
DEPDC4Q8N2C3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 AP001542.1-201ENST00000591314 200 ntBASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
DEPDC4Q8N2C3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms