Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 MTHFR-210ENST00000641407 2387 ntBASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 AC012508.2-201ENST00000567613 1472 ntBASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 AL359881.3-201ENST00000602640 1721 ntBASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 DNAJB3-201ENST00000446806 729 ntBASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 AP002472.1-201ENST00000577490 586 ntBASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 MTDHP5-201ENST00000598980 586 ntBASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM42Q8IWZ5 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 AZGP1P1-201ENST00000411909 902 ntBASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 MIR3687-2-201ENST00000577708 61 ntBASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 MIR3687-1-201ENST00000614492 61 ntBASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 AC117489.1-201ENST00000625169 3217 ntBASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms