Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 AC006504.4-201ENST00000592118 1568 ntBASIC12.78□□□□□ -0.36
ZNF546Q86UE3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.78□□□□□ -0.36
ZNF546Q86UE3 RPS15P9-201ENST00000494093 319 ntBASIC12.78□□□□□ -0.36
ZNF546Q86UE3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF546Q86UE3 AC015818.8-201ENST00000587907 1519 ntBASIC12.78□□□□□ -0.36
ZNF546Q86UE3 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF546Q86UE3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.77□□□□□ -0.36
ZNF546Q86UE3 BNIP3P1-202ENST00000550043 1585 ntBASIC12.77□□□□□ -0.36
ZNF546Q86UE3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
ZNF546Q86UE3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF546Q86UE3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF546Q86UE3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF546Q86UE3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.77□□□□□ -0.36
ZNF546Q86UE3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 RNU1-129P-201ENST00000384064 167 ntBASIC12.77□□□□□ -0.37
ZNF546Q86UE3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 PMS2P4-201ENST00000412466 1052 ntBASIC12.77□□□□□ -0.37
ZNF546Q86UE3 SART3-203ENST00000546611 1184 ntBASIC12.77□□□□□ -0.37
ZNF546Q86UE3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 U1.21-201ENST00000580816 167 ntBASIC12.77□□□□□ -0.37
ZNF546Q86UE3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 AC008608.2-201ENST00000606089 416 ntBASIC12.77□□□□□ -0.37
ZNF546Q86UE3 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF546Q86UE3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms