Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 MIR557-201ENST00000385239 98 ntBASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 AC018463.1-201ENST00000456674 917 ntBASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 AC003102.2-201ENST00000589195 1469 ntBASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT28Q7Z3Y7 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 Z69890.1-201ENST00000382990 339 ntBASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 AL157792.1-201ENST00000488281 530 ntBASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 ALG3P1-201ENST00000508806 1114 ntBASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 AC024909.3-201ENST00000611513 2257 ntBASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 CICP13-201ENST00000422015 2789 ntBASIC20.28■□□□□ 0.84
KRT28Q7Z3Y7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT28Q7Z3Y7 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
KRT28Q7Z3Y7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.27■□□□□ 0.84
KRT28Q7Z3Y7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
KRT28Q7Z3Y7 MBP-201ENST00000354542 575 ntTSL 2 BASIC20.27■□□□□ 0.84
KRT28Q7Z3Y7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT28Q7Z3Y7 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT28Q7Z3Y7 CHCHD2P9-201ENST00000461726 456 ntBASIC20.27■□□□□ 0.84
KRT28Q7Z3Y7 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC20.27■□□□□ 0.84
KRT28Q7Z3Y7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC20.27■□□□□ 0.84
KRT28Q7Z3Y7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT28Q7Z3Y7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
KRT28Q7Z3Y7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT28Q7Z3Y7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
KRT28Q7Z3Y7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT28Q7Z3Y7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
KRT28Q7Z3Y7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT28Q7Z3Y7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT28Q7Z3Y7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT28Q7Z3Y7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KRT28Q7Z3Y7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT28Q7Z3Y7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT28Q7Z3Y7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
KRT28Q7Z3Y7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT28Q7Z3Y7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRT28Q7Z3Y7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRT28Q7Z3Y7 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KRT28Q7Z3Y7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT28Q7Z3Y7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
KRT28Q7Z3Y7 BANF1P3-201ENST00000412556 261 ntBASIC20.26■□□□□ 0.83
KRT28Q7Z3Y7 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC20.26■□□□□ 0.83
KRT28Q7Z3Y7 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms