Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 AC007292.2-201ENST00000593524 1812 ntBASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 MIR600HG-201ENST00000449175 5984 ntBASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 RN7SL837P-201ENST00000463010 287 ntBASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 AC015936.2-201ENST00000593177 259 ntBASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TTC39BQ5VTQ0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TTC39BQ5VTQ0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.96■□□□□ 0.14
TTC39BQ5VTQ0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.96■□□□□ 0.14
TTC39BQ5VTQ0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.96■□□□□ 0.14
TTC39BQ5VTQ0 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.96■□□□□ 0.14
TTC39BQ5VTQ0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TTC39BQ5VTQ0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.96■□□□□ 0.14
TTC39BQ5VTQ0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TTC39BQ5VTQ0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.14
TTC39BQ5VTQ0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
TTC39BQ5VTQ0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 GIMAP3P-201ENST00000495150 836 ntBASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TTC39BQ5VTQ0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms