Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBWD3Q5JTY5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CBWD3Q5JTY5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.5■□□□□ 0.23
CBWD3Q5JTY5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.5■□□□□ 0.23
CBWD3Q5JTY5 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.5■□□□□ 0.23
CBWD3Q5JTY5 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CBWD3Q5JTY5 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.5■□□□□ 0.23
CBWD3Q5JTY5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBWD3Q5JTY5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CBWD3Q5JTY5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CBWD3Q5JTY5 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CBWD3Q5JTY5 AC068418.2-201ENST00000577309 3703 ntBASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 MTHFR-210ENST00000641407 2387 ntBASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 RNU1-114P-201ENST00000365297 166 ntBASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 SOCS2P1-201ENST00000417727 557 ntBASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 AC133539.2-201ENST00000604757 467 ntBASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.49■□□□□ 0.23
CBWD3Q5JTY5 AC099063.4-201ENST00000641099 1602 ntBASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 TP53TG3HP-202ENST00000569755 579 ntBASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.48■□□□□ 0.23
CBWD3Q5JTY5 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBWD3Q5JTY5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBWD3Q5JTY5 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.47■□□□□ 0.23
CBWD3Q5JTY5 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CBWD3Q5JTY5 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBWD3Q5JTY5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBWD3Q5JTY5 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CBWD3Q5JTY5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CBWD3Q5JTY5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CBWD3Q5JTY5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBWD3Q5JTY5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBWD3Q5JTY5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBWD3Q5JTY5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms