Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 DUX4L46-201ENST00000566845 751 ntBASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 AC090164.2-201ENST00000611487 516 ntBASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 AL596257.1-201ENST00000641463 2694 ntBASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 AC125604.1-201ENST00000496255 707 ntBASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 PRKXP1-201ENST00000561423 1122 ntBASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 SNORD3B-2-202ENST00000571722 791 ntBASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 AC020910.5-201ENST00000623668 1865 ntBASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM71Q2Q1W2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 AC007274.2-201ENST00000421675 662 ntBASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 MAGEA5-201ENST00000446757 942 ntBASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms