Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 KRT8P21-201ENST00000430398 1491 ntBASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 AL645937.2-201ENST00000396808 931 ntBASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 KRT17P4-201ENST00000429445 819 ntBASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 AL358472.3-201ENST00000608147 415 ntBASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 CROCCP1-201ENST00000426910 5675 ntBASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 AL583805.1-201ENST00000391389 531 ntBASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 HIST2H2BA-201ENST00000412169 381 ntBASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 FAM58BP-201ENST00000439056 645 ntBASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 VDAC1P1-201ENST00000439229 848 ntBASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 AP000358.1-201ENST00000456260 156 ntBASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 RN7SL396P-201ENST00000471086 295 ntBASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 AC022616.1-201ENST00000518688 554 ntBASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 NUDT4P2-201ENST00000578341 546 ntBASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 AC005618.3-201ENST00000624928 458 ntBASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 CLUHP2-201ENST00000426660 1303 ntBASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RSPO4Q2I0M5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
RSPO4Q2I0M5 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms