Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDK3Q00526 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.98□□□□□ -0.01
CDK3Q00526 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 CICP6-201ENST00000457191 2729 ntBASIC14.98□□□□□ -0.01
CDK3Q00526 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.98□□□□□ -0.01
CDK3Q00526 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CDK3Q00526 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.98□□□□□ -0.01
CDK3Q00526 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.98□□□□□ -0.01
CDK3Q00526 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.98□□□□□ -0.01
CDK3Q00526 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CDK3Q00526 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 MIR1202-201ENST00000408529 83 ntBASIC14.98□□□□□ -0.01
CDK3Q00526 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
CDK3Q00526 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDK3Q00526 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 AC026434.2-201ENST00000506094 1078 ntBASIC14.98□□□□□ -0.01
CDK3Q00526 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.98□□□□□ -0.01
CDK3Q00526 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.98□□□□□ -0.01
CDK3Q00526 DUX4L45-201ENST00000566406 1057 ntBASIC14.98□□□□□ -0.01
CDK3Q00526 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.98□□□□□ -0.01
CDK3Q00526 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.98□□□□□ -0.01
CDK3Q00526 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
CDK3Q00526 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
CDK3Q00526 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.98□□□□□ -0.01
CDK3Q00526 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDK3Q00526 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDK3Q00526 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CDK3Q00526 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CDK3Q00526 WASH3P-207ENST00000560956 1394 ntBASIC14.98□□□□□ -0.01
CDK3Q00526 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.97□□□□□ -0.01
CDK3Q00526 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.97□□□□□ -0.01
CDK3Q00526 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CDK3Q00526 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CDK3Q00526 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDK3Q00526 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.97□□□□□ -0.01
CDK3Q00526 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.97□□□□□ -0.01
CDK3Q00526 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.97□□□□□ -0.01
CDK3Q00526 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.97□□□□□ -0.01
CDK3Q00526 AC010328.2-201ENST00000597698 1111 ntBASIC14.97□□□□□ -0.01
CDK3Q00526 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.97□□□□□ -0.01
CDK3Q00526 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CDK3Q00526 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.97□□□□□ -0.01
CDK3Q00526 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.97□□□□□ -0.01
CDK3Q00526 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CDK3Q00526 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK3Q00526 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.97□□□□□ -0.01
CDK3Q00526 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.97□□□□□ -0.01
CDK3Q00526 AC073347.1-201ENST00000421633 2643 ntBASIC14.96□□□□□ -0.01
CDK3Q00526 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDK3Q00526 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CDK3Q00526 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDK3Q00526 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDK3Q00526 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDK3Q00526 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms