Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.53□□□□□ -0.08
GFERP55789 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
GFERP55789 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.53□□□□□ -0.08
GFERP55789 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.53□□□□□ -0.08
GFERP55789 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 AC023024.2-201ENST00000623561 1993 ntBASIC14.53□□□□□ -0.08
GFERP55789 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.53□□□□□ -0.08
GFERP55789 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 AC012508.2-201ENST00000567613 1472 ntBASIC14.53□□□□□ -0.08
GFERP55789 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
GFERP55789 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.53□□□□□ -0.08
GFERP55789 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.53□□□□□ -0.08
GFERP55789 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.53□□□□□ -0.08
GFERP55789 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.53□□□□□ -0.08
GFERP55789 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.53□□□□□ -0.08
GFERP55789 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.53□□□□□ -0.08
GFERP55789 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.53□□□□□ -0.08
GFERP55789 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.53□□□□□ -0.08
GFERP55789 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
GFERP55789 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.53□□□□□ -0.08
GFERP55789 AC104982.3-201ENST00000581995 514 ntBASIC14.53□□□□□ -0.08
GFERP55789 MIR3615-201ENST00000581999 87 ntBASIC14.53□□□□□ -0.08
GFERP55789 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.53□□□□□ -0.08
GFERP55789 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
GFERP55789 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
GFERP55789 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.53□□□□□ -0.08
GFERP55789 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
GFERP55789 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
GFERP55789 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.53□□□□□ -0.08
GFERP55789 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFERP55789 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.53□□□□□ -0.08
GFERP55789 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GFERP55789 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
GFERP55789 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
GFERP55789 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
GFERP55789 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GFERP55789 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GFERP55789 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GFERP55789 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
GFERP55789 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
GFERP55789 AL133338.1-201ENST00000565695 1517 ntBASIC14.52□□□□□ -0.08
GFERP55789 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
GFERP55789 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GFERP55789 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.52□□□□□ -0.08
GFERP55789 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GFERP55789 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GFERP55789 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
GFERP55789 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
GFERP55789 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GFERP55789 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GFERP55789 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
GFERP55789 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.52□□□□□ -0.09
GFERP55789 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
GFERP55789 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GFERP55789 GPAA1P2-201ENST00000417923 928 ntBASIC14.52□□□□□ -0.09
GFERP55789 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.52□□□□□ -0.09
GFERP55789 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.52□□□□□ -0.09
GFERP55789 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.52□□□□□ -0.09
GFERP55789 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.52□□□□□ -0.09
GFERP55789 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.52□□□□□ -0.09
GFERP55789 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.52□□□□□ -0.09
GFERP55789 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.52□□□□□ -0.09
GFERP55789 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.52□□□□□ -0.09
GFERP55789 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GFERP55789 AL022328.3-201ENST00000607943 679 ntBASIC14.52□□□□□ -0.09
GFERP55789 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.52□□□□□ -0.09
GFERP55789 AL008638.5-201ENST00000623814 1298 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms