Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 RPSAP31-201ENST00000416648 895 ntBASIC18.89■□□□□ 0.61
AFDNP55196 ISCA2P1-201ENST00000425548 448 ntBASIC18.89■□□□□ 0.61
AFDNP55196 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.89■□□□□ 0.61
AFDNP55196 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.89■□□□□ 0.61
AFDNP55196 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
AFDNP55196 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.89■□□□□ 0.61
AFDNP55196 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC18.89■□□□□ 0.61
AFDNP55196 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.89■□□□□ 0.61
AFDNP55196 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AFDNP55196 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AFDNP55196 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AFDNP55196 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AFDNP55196 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AFDNP55196 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.89■□□□□ 0.61
AFDNP55196 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AFDNP55196 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
AFDNP55196 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.88■□□□□ 0.61
AFDNP55196 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.88■□□□□ 0.61
AFDNP55196 AC098935.1-201ENST00000446057 611 ntBASIC18.88■□□□□ 0.61
AFDNP55196 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 AC019193.1-201ENST00000506678 823 ntBASIC18.88■□□□□ 0.61
AFDNP55196 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.88■□□□□ 0.61
AFDNP55196 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.88■□□□□ 0.61
AFDNP55196 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.88■□□□□ 0.61
AFDNP55196 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.88■□□□□ 0.61
AFDNP55196 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.88■□□□□ 0.61
AFDNP55196 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.88■□□□□ 0.61
AFDNP55196 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.88■□□□□ 0.61
AFDNP55196 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.88■□□□□ 0.61
AFDNP55196 AL162727.3-201ENST00000635661 2787 ntBASIC18.88■□□□□ 0.61
AFDNP55196 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
AFDNP55196 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.88■□□□□ 0.61
AFDNP55196 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.88■□□□□ 0.61
AFDNP55196 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
AFDNP55196 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.88■□□□□ 0.61
AFDNP55196 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.88■□□□□ 0.61
AFDNP55196 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.88■□□□□ 0.61
AFDNP55196 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
AFDNP55196 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
AFDNP55196 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.88■□□□□ 0.61
AFDNP55196 TLE1P1-201ENST00000422965 589 ntBASIC18.88■□□□□ 0.61
AFDNP55196 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.88■□□□□ 0.61
AFDNP55196 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC18.88■□□□□ 0.61
AFDNP55196 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 AC138894.2-201ENST00000602838 371 ntBASIC18.88■□□□□ 0.61
AFDNP55196 AL353770.1-201ENST00000614915 403 ntBASIC18.88■□□□□ 0.61
AFDNP55196 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AFDNP55196 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
AFDNP55196 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 AL360270.3-201ENST00000609118 1348 ntBASIC18.87■□□□□ 0.61
AFDNP55196 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.87■□□□□ 0.61
AFDNP55196 RN7SKP230-201ENST00000365642 335 ntBASIC18.87■□□□□ 0.61
AFDNP55196 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
AFDNP55196 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.87■□□□□ 0.61
AFDNP55196 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.87■□□□□ 0.61
AFDNP55196 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.87■□□□□ 0.61
AFDNP55196 MEG3_2.1-201ENST00000611456 105 ntBASIC18.87■□□□□ 0.61
AFDNP55196 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.87■□□□□ 0.61
AFDNP55196 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
AFDNP55196 LINC00528-201ENST00000600723 2160 ntBASIC18.87■□□□□ 0.61
AFDNP55196 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
AFDNP55196 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
AFDNP55196 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.87■□□□□ 0.61
AFDNP55196 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.87■□□□□ 0.61
AFDNP55196 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AFDNP55196 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
AFDNP55196 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
AFDNP55196 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
AFDNP55196 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms