Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
APOC4P55056 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
APOC4P55056 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.21□□□□□ -0.62
APOC4P55056 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
APOC4P55056 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
APOC4P55056 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.21□□□□□ -0.62
APOC4P55056 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
APOC4P55056 AC087481.3-201ENST00000602886 1894 ntBASIC11.21□□□□□ -0.62
APOC4P55056 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
APOC4P55056 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
APOC4P55056 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
APOC4P55056 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.2□□□□□ -0.62
APOC4P55056 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.2□□□□□ -0.62
APOC4P55056 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.2□□□□□ -0.62
APOC4P55056 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
APOC4P55056 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
APOC4P55056 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
APOC4P55056 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.2□□□□□ -0.62
APOC4P55056 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
APOC4P55056 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC11.2□□□□□ -0.62
APOC4P55056 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 AC007274.1-201ENST00000439805 662 ntBASIC11.2□□□□□ -0.62
APOC4P55056 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.2□□□□□ -0.62
APOC4P55056 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.2□□□□□ -0.62
APOC4P55056 RNA5SP486-201ENST00000515961 83 ntBASIC11.2□□□□□ -0.62
APOC4P55056 RNA5SP412-201ENST00000516234 123 ntBASIC11.2□□□□□ -0.62
APOC4P55056 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.2□□□□□ -0.62
APOC4P55056 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
APOC4P55056 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 SNX29P1-201ENST00000548357 1007 ntBASIC11.2□□□□□ -0.62
APOC4P55056 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC11.2□□□□□ -0.62
APOC4P55056 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC11.2□□□□□ -0.62
APOC4P55056 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.2□□□□□ -0.62
APOC4P55056 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
APOC4P55056 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
APOC4P55056 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 PCDHA1-201ENST00000378133 2726 ntBASIC11.2□□□□□ -0.62
APOC4P55056 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
APOC4P55056 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC11.2□□□□□ -0.62
APOC4P55056 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.2□□□□□ -0.62
APOC4P55056 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
APOC4P55056 AC105250.1-201ENST00000509378 2057 ntBASIC11.2□□□□□ -0.62
APOC4P55056 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC11.2□□□□□ -0.62
APOC4P55056 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC4P55056 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.19□□□□□ -0.62
APOC4P55056 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
APOC4P55056 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
APOC4P55056 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.19□□□□□ -0.62
APOC4P55056 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
APOC4P55056 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.19□□□□□ -0.62
APOC4P55056 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC11.19□□□□□ -0.62
APOC4P55056 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
APOC4P55056 CD8B2-202ENST00000417670 633 ntBASIC11.19□□□□□ -0.62
APOC4P55056 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11.19□□□□□ -0.62
APOC4P55056 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 HLA-V-201ENST00000429037 534 ntBASIC11.19□□□□□ -0.62
APOC4P55056 CSF2RBP1-201ENST00000447905 391 ntBASIC11.19□□□□□ -0.62
APOC4P55056 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC11.19□□□□□ -0.62
APOC4P55056 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.19□□□□□ -0.62
APOC4P55056 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms