Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC051619.9-201ENST00000623237 597 ntBASIC18.58■□□□□ 0.57
NUP98P52948 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NUP98P52948 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.58■□□□□ 0.57
NUP98P52948 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
NUP98P52948 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NUP98P52948 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NUP98P52948 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUP98P52948 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
NUP98P52948 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
NUP98P52948 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NUP98P52948 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUP98P52948 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NUP98P52948 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.58■□□□□ 0.56
NUP98P52948 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUP98P52948 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NUP98P52948 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.58■□□□□ 0.56
NUP98P52948 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUP98P52948 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NUP98P52948 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUP98P52948 IGF1-203ENST00000392904 761 ntTSL 5 BASIC18.58■□□□□ 0.56
NUP98P52948 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUP98P52948 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUP98P52948 ST13P19-201ENST00000442505 1124 ntBASIC18.58■□□□□ 0.56
NUP98P52948 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.58■□□□□ 0.56
NUP98P52948 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
NUP98P52948 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NUP98P52948 AC027237.1-201ENST00000560942 655 ntBASIC18.58■□□□□ 0.56
NUP98P52948 RN7SL555P-201ENST00000584742 339 ntBASIC18.58■□□□□ 0.56
NUP98P52948 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC18.58■□□□□ 0.56
NUP98P52948 U62317.3-201ENST00000608319 855 ntBASIC18.58■□□□□ 0.56
NUP98P52948 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.58■□□□□ 0.56
NUP98P52948 AC007718.1-201ENST00000621078 280 ntBASIC18.58■□□□□ 0.56
NUP98P52948 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.58■□□□□ 0.56
NUP98P52948 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.58■□□□□ 0.56
NUP98P52948 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.58■□□□□ 0.56
NUP98P52948 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.58■□□□□ 0.56
NUP98P52948 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.58■□□□□ 0.56
NUP98P52948 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP98P52948 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.57■□□□□ 0.56
NUP98P52948 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP98P52948 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP98P52948 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NUP98P52948 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NUP98P52948 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP98P52948 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.57■□□□□ 0.56
NUP98P52948 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.57■□□□□ 0.56
NUP98P52948 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP98P52948 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.57■□□□□ 0.56
NUP98P52948 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.57■□□□□ 0.56
NUP98P52948 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP98P52948 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP98P52948 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NUP98P52948 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP98P52948 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.57■□□□□ 0.56
NUP98P52948 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.57■□□□□ 0.56
NUP98P52948 NOC2LP1-201ENST00000450578 752 ntBASIC18.57■□□□□ 0.56
NUP98P52948 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.57■□□□□ 0.56
NUP98P52948 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.57■□□□□ 0.56
NUP98P52948 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.57■□□□□ 0.56
NUP98P52948 MIR3188-201ENST00000583494 85 ntBASIC18.57■□□□□ 0.56
NUP98P52948 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.57■□□□□ 0.56
NUP98P52948 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.57■□□□□ 0.56
NUP98P52948 AL022334.2-201ENST00000610000 484 ntBASIC18.57■□□□□ 0.56
NUP98P52948 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NUP98P52948 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NUP98P52948 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP98P52948 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NUP98P52948 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.57■□□□□ 0.56
NUP98P52948 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NUP98P52948 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.57■□□□□ 0.56
NUP98P52948 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
NUP98P52948 KRT8P31-201ENST00000504812 1408 ntBASIC18.57■□□□□ 0.56
NUP98P52948 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUP98P52948 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.56■□□□□ 0.56
NUP98P52948 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.56■□□□□ 0.56
NUP98P52948 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.56■□□□□ 0.56
NUP98P52948 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUP98P52948 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC18.56■□□□□ 0.56
NUP98P52948 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUP98P52948 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.56■□□□□ 0.56
NUP98P52948 AC008267.1-201ENST00000474858 1069 ntBASIC18.56■□□□□ 0.56
NUP98P52948 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.56■□□□□ 0.56
NUP98P52948 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.56■□□□□ 0.56
NUP98P52948 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.56■□□□□ 0.56
NUP98P52948 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.56■□□□□ 0.56
NUP98P52948 AC009884.2-201ENST00000603110 324 ntBASIC18.56■□□□□ 0.56
NUP98P52948 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.56■□□□□ 0.56
NUP98P52948 AL353726.2-201ENST00000623259 884 ntBASIC18.56■□□□□ 0.56
NUP98P52948 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.56■□□□□ 0.56
NUP98P52948 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUP98P52948 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
NUP98P52948 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUP98P52948 KRT8P28-201ENST00000433288 1390 ntBASIC18.56■□□□□ 0.56
NUP98P52948 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NUP98P52948 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.56■□□□□ 0.56
NUP98P52948 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.56■□□□□ 0.56
NUP98P52948 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUP98P52948 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUP98P52948 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.56■□□□□ 0.56
NUP98P52948 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms