Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.22■□□□□ 0.35
USP11P51784 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.22■□□□□ 0.35
USP11P51784 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
USP11P51784 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
USP11P51784 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.21■□□□□ 0.35
USP11P51784 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 PDIA3P1-201ENST00000471856 1510 ntBASIC17.21■□□□□ 0.35
USP11P51784 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
USP11P51784 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.21■□□□□ 0.35
USP11P51784 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
USP11P51784 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.21■□□□□ 0.35
USP11P51784 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.21■□□□□ 0.35
USP11P51784 CD8B2-202ENST00000417670 633 ntBASIC17.21■□□□□ 0.35
USP11P51784 RPL7P3-201ENST00000441388 714 ntBASIC17.21■□□□□ 0.35
USP11P51784 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.21■□□□□ 0.35
USP11P51784 AC234783.1-201ENST00000441761 496 ntBASIC17.21■□□□□ 0.35
USP11P51784 AC026434.2-201ENST00000506094 1078 ntBASIC17.21■□□□□ 0.35
USP11P51784 RNA5SP486-201ENST00000515961 83 ntBASIC17.21■□□□□ 0.35
USP11P51784 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.21■□□□□ 0.35
USP11P51784 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
USP11P51784 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.21■□□□□ 0.35
USP11P51784 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.21■□□□□ 0.35
USP11P51784 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
USP11P51784 AC244669.2-201ENST00000612320 853 ntBASIC17.21■□□□□ 0.35
USP11P51784 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.21■□□□□ 0.35
USP11P51784 ENPP7P14-201ENST00000621765 1040 ntBASIC17.21■□□□□ 0.35
USP11P51784 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.21■□□□□ 0.35
USP11P51784 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.21■□□□□ 0.35
USP11P51784 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.21■□□□□ 0.35
USP11P51784 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
USP11P51784 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
USP11P51784 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP11P51784 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
USP11P51784 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
USP11P51784 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
USP11P51784 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
USP11P51784 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
USP11P51784 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.2■□□□□ 0.34
USP11P51784 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
USP11P51784 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.2■□□□□ 0.34
USP11P51784 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 GK-202ENST00000378941 458 ntTSL 3 BASIC17.2■□□□□ 0.34
USP11P51784 MIR1909-201ENST00000411312 80 ntBASIC17.2■□□□□ 0.34
USP11P51784 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.2■□□□□ 0.34
USP11P51784 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 AC245100.3-201ENST00000441281 285 ntBASIC17.2■□□□□ 0.34
USP11P51784 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.2■□□□□ 0.34
USP11P51784 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.2■□□□□ 0.34
USP11P51784 HILS1-202ENST00000545329 423 ntBASIC17.2■□□□□ 0.34
USP11P51784 KRT90P-201ENST00000549264 1064 ntBASIC17.2■□□□□ 0.34
USP11P51784 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
USP11P51784 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.2■□□□□ 0.34
USP11P51784 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
USP11P51784 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 TCAF2P1-201ENST00000291129 2421 ntBASIC17.2■□□□□ 0.34
USP11P51784 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
USP11P51784 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP11P51784 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
USP11P51784 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.19■□□□□ 0.34
USP11P51784 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
USP11P51784 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.19■□□□□ 0.34
USP11P51784 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms