Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.53□□□□□ -0.24
CCR9P51686 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.53□□□□□ -0.24
CCR9P51686 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.53□□□□□ -0.24
CCR9P51686 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.53□□□□□ -0.24
CCR9P51686 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.52□□□□□ -0.24
CCR9P51686 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCR9P51686 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.52□□□□□ -0.24
CCR9P51686 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCR9P51686 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.52□□□□□ -0.24
CCR9P51686 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.52□□□□□ -0.24
CCR9P51686 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCR9P51686 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCR9P51686 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.52□□□□□ -0.24
CCR9P51686 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCR9P51686 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.52□□□□□ -0.24
CCR9P51686 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCR9P51686 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CCR9P51686 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCR9P51686 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CCR9P51686 AL627223.1-201ENST00000416693 442 ntBASIC13.52□□□□□ -0.25
CCR9P51686 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.52□□□□□ -0.25
CCR9P51686 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.52□□□□□ -0.25
CCR9P51686 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.52□□□□□ -0.25
CCR9P51686 FAM58DP-201ENST00000428076 619 ntBASIC13.52□□□□□ -0.25
CCR9P51686 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCR9P51686 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.52□□□□□ -0.25
CCR9P51686 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.52□□□□□ -0.25
CCR9P51686 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.52□□□□□ -0.25
CCR9P51686 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.52□□□□□ -0.25
CCR9P51686 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.52□□□□□ -0.25
CCR9P51686 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.52□□□□□ -0.25
CCR9P51686 AL513210.1-201ENST00000629608 234 ntBASIC13.52□□□□□ -0.25
CCR9P51686 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.52□□□□□ -0.25
CCR9P51686 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCR9P51686 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCR9P51686 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCR9P51686 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCR9P51686 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCR9P51686 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCR9P51686 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCR9P51686 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCR9P51686 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CCR9P51686 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.52□□□□□ -0.25
CCR9P51686 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.52□□□□□ -0.25
CCR9P51686 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCR9P51686 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCR9P51686 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CCR9P51686 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
CCR9P51686 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.51□□□□□ -0.25
CCR9P51686 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.51□□□□□ -0.25
CCR9P51686 REXO1L4P-201ENST00000605109 1937 ntBASIC13.51□□□□□ -0.25
CCR9P51686 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.51□□□□□ -0.25
CCR9P51686 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.51□□□□□ -0.25
CCR9P51686 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CCR9P51686 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.51□□□□□ -0.25
CCR9P51686 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCR9P51686 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
CCR9P51686 CEND1P1-201ENST00000451006 455 ntBASIC13.51□□□□□ -0.25
CCR9P51686 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.51□□□□□ -0.25
CCR9P51686 KRT18P58-201ENST00000527480 1120 ntBASIC13.51□□□□□ -0.25
CCR9P51686 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.51□□□□□ -0.25
CCR9P51686 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CCR9P51686 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.51□□□□□ -0.25
CCR9P51686 AL079307.3-201ENST00000556114 283 ntBASIC13.51□□□□□ -0.25
CCR9P51686 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.51□□□□□ -0.25
CCR9P51686 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
CCR9P51686 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.51□□□□□ -0.25
CCR9P51686 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.51□□□□□ -0.25
CCR9P51686 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CCR9P51686 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.51□□□□□ -0.25
CCR9P51686 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCR9P51686 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms