Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.84■□□□□ 0.29
GPC3P51654 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.84■□□□□ 0.29
GPC3P51654 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.84■□□□□ 0.29
GPC3P51654 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC3P51654 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.84■□□□□ 0.29
GPC3P51654 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.84■□□□□ 0.29
GPC3P51654 AC023310.1-201ENST00000554836 735 ntBASIC16.84■□□□□ 0.29
GPC3P51654 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.84■□□□□ 0.29
GPC3P51654 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.84■□□□□ 0.29
GPC3P51654 RN7SL48P-201ENST00000579283 293 ntBASIC16.84■□□□□ 0.29
GPC3P51654 LRRC59-203ENST00000576448 1531 ntBASIC16.84■□□□□ 0.29
GPC3P51654 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC3P51654 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC3P51654 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
GPC3P51654 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
GPC3P51654 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.84■□□□□ 0.29
GPC3P51654 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.84■□□□□ 0.29
GPC3P51654 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GPC3P51654 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GPC3P51654 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC3P51654 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC3P51654 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC3P51654 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
GPC3P51654 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
GPC3P51654 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GPC3P51654 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GPC3P51654 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GPC3P51654 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GPC3P51654 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC3P51654 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GPC3P51654 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC3P51654 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GPC3P51654 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC3P51654 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GPC3P51654 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC3P51654 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC3P51654 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC3P51654 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.83■□□□□ 0.28
GPC3P51654 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC3P51654 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.83■□□□□ 0.28
GPC3P51654 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
GPC3P51654 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GPC3P51654 AHCYP2-201ENST00000430630 1300 ntBASIC16.83■□□□□ 0.28
GPC3P51654 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GPC3P51654 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.83■□□□□ 0.28
GPC3P51654 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.83■□□□□ 0.28
GPC3P51654 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
GPC3P51654 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.83■□□□□ 0.28
GPC3P51654 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GPC3P51654 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.83■□□□□ 0.28
GPC3P51654 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
GPC3P51654 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.83■□□□□ 0.28
GPC3P51654 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GPC3P51654 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
GPC3P51654 ECM1P1-201ENST00000604092 1279 ntBASIC16.83■□□□□ 0.28
GPC3P51654 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.83■□□□□ 0.28
GPC3P51654 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
GPC3P51654 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
GPC3P51654 AC006453.4-201ENST00000636949 1252 ntBASIC16.83■□□□□ 0.28
GPC3P51654 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC3P51654 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC3P51654 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
GPC3P51654 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC3P51654 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.83■□□□□ 0.28
GPC3P51654 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
GPC3P51654 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC3P51654 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
GPC3P51654 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC3P51654 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GPC3P51654 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GPC3P51654 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC3P51654 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.82■□□□□ 0.28
GPC3P51654 CD8B2-202ENST00000417670 633 ntBASIC16.82■□□□□ 0.28
GPC3P51654 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.82■□□□□ 0.28
GPC3P51654 EIF3FP3-201ENST00000434851 1086 ntBASIC16.82■□□□□ 0.28
GPC3P51654 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GPC3P51654 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.82■□□□□ 0.28
GPC3P51654 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.82■□□□□ 0.28
GPC3P51654 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC3P51654 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.82■□□□□ 0.28
GPC3P51654 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.82■□□□□ 0.28
GPC3P51654 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.82■□□□□ 0.28
GPC3P51654 RN7SL219P-201ENST00000582872 296 ntBASIC16.82■□□□□ 0.28
GPC3P51654 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.82■□□□□ 0.28
GPC3P51654 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.82■□□□□ 0.28
GPC3P51654 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms