Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.67□□□□□ -0.22
SRP9P49458 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.67□□□□□ -0.22
SRP9P49458 AC069120.2-201ENST00000524091 540 ntBASIC13.67□□□□□ -0.22
SRP9P49458 AC140878.1-201ENST00000565277 250 ntBASIC13.67□□□□□ -0.22
SRP9P49458 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.67□□□□□ -0.22
SRP9P49458 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.67□□□□□ -0.22
SRP9P49458 RN7SL828P-201ENST00000607615 303 ntBASIC13.67□□□□□ -0.22
SRP9P49458 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.67□□□□□ -0.22
SRP9P49458 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.67□□□□□ -0.22
SRP9P49458 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.67□□□□□ -0.22
SRP9P49458 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.67□□□□□ -0.22
SRP9P49458 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.67□□□□□ -0.22
SRP9P49458 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SRP9P49458 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.67□□□□□ -0.22
SRP9P49458 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.67□□□□□ -0.22
SRP9P49458 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
SRP9P49458 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.66□□□□□ -0.22
SRP9P49458 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.66□□□□□ -0.22
SRP9P49458 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.66□□□□□ -0.22
SRP9P49458 ZBED1P1-201ENST00000502364 1930 ntBASIC13.66□□□□□ -0.22
SRP9P49458 BX640514.1-201ENST00000583223 1918 ntBASIC13.66□□□□□ -0.22
SRP9P49458 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 AL691432.1-201ENST00000596308 1422 ntBASIC13.66□□□□□ -0.22
SRP9P49458 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
SRP9P49458 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
SRP9P49458 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.66□□□□□ -0.22
SRP9P49458 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.66□□□□□ -0.22
SRP9P49458 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.66□□□□□ -0.22
SRP9P49458 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.66□□□□□ -0.22
SRP9P49458 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.66□□□□□ -0.22
SRP9P49458 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.66□□□□□ -0.22
SRP9P49458 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.66□□□□□ -0.22
SRP9P49458 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.66□□□□□ -0.22
SRP9P49458 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.66□□□□□ -0.22
SRP9P49458 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.66□□□□□ -0.22
SRP9P49458 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.66□□□□□ -0.22
SRP9P49458 AL589739.1-201ENST00000607720 493 ntBASIC13.66□□□□□ -0.22
SRP9P49458 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.66□□□□□ -0.22
SRP9P49458 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.66□□□□□ -0.22
SRP9P49458 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.66□□□□□ -0.22
SRP9P49458 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.66□□□□□ -0.22
SRP9P49458 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.66□□□□□ -0.22
SRP9P49458 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.66□□□□□ -0.22
SRP9P49458 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SRP9P49458 AC127383.1-201ENST00000444697 1800 ntBASIC13.66□□□□□ -0.22
SRP9P49458 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SRP9P49458 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.66□□□□□ -0.22
SRP9P49458 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 AC097359.2-201ENST00000604992 2389 ntBASIC13.66□□□□□ -0.22
SRP9P49458 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.66□□□□□ -0.22
SRP9P49458 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRP9P49458 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SRP9P49458 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
SRP9P49458 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
SRP9P49458 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
SRP9P49458 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.65□□□□□ -0.22
SRP9P49458 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
SRP9P49458 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.65□□□□□ -0.22
SRP9P49458 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.65□□□□□ -0.22
SRP9P49458 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.65□□□□□ -0.22
SRP9P49458 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
SRP9P49458 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.65□□□□□ -0.22
SRP9P49458 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.65□□□□□ -0.22
SRP9P49458 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms