Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A2P43004 AC005912.2-201ENST00000619492 2400 ntBASIC15.26■□□□□ 0.03
SLC1A2P43004 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC1A2P43004 AC007191.1-201ENST00000623179 2995 ntBASIC15.26■□□□□ 0.03
SLC1A2P43004 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A2P43004 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A2P43004 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SLC1A2P43004 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC1A2P43004 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SLC1A2P43004 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SLC1A2P43004 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A2P43004 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SLC1A2P43004 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC1A2P43004 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC1A2P43004 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A2P43004 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC1A2P43004 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC1A2P43004 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A2P43004 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC1A2P43004 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A2P43004 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SLC1A2P43004 AC107373.2-201ENST00000607735 490 ntBASIC15.25■□□□□ 0.03
SLC1A2P43004 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC1A2P43004 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 AC026748.1-201ENST00000624349 3251 ntBASIC15.25■□□□□ 0.03
SLC1A2P43004 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SLC1A2P43004 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A2P43004 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC1A2P43004 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC1A2P43004 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC1A2P43004 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
SLC1A2P43004 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A2P43004 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC1A2P43004 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC1A2P43004 SNX18-202ENST00000343017 3140 ntBASIC15.24■□□□□ 0.03
SLC1A2P43004 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SLC1A2P43004 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC1A2P43004 AC093525.8-201ENST00000624099 1342 ntBASIC15.24■□□□□ 0.03
SLC1A2P43004 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A2P43004 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
SLC1A2P43004 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC1A2P43004 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC1A2P43004 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A2P43004 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLC1A2P43004 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A2P43004 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SLC1A2P43004 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.24■□□□□ 0.03
SLC1A2P43004 VDAC1P7-201ENST00000462417 847 ntBASIC15.24■□□□□ 0.03
SLC1A2P43004 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.24■□□□□ 0.03
SLC1A2P43004 AC026410.3-201ENST00000514280 936 ntBASIC15.24■□□□□ 0.03
SLC1A2P43004 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A2P43004 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC1A2P43004 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC1A2P43004 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC1A2P43004 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A2P43004 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC1A2P43004 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLC1A2P43004 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A2P43004 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms