Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HMGCLP35914 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.2■□□□□ 0.02
HMGCLP35914 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
HMGCLP35914 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HMGCLP35914 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 TNRC18P2-201ENST00000417666 2714 ntBASIC15.2■□□□□ 0.02
HMGCLP35914 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HMGCLP35914 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HMGCLP35914 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
HMGCLP35914 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HMGCLP35914 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.19■□□□□ 0.02
HMGCLP35914 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HMGCLP35914 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.19■□□□□ 0.02
HMGCLP35914 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
HMGCLP35914 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HMGCLP35914 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
HMGCLP35914 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 TTTY23B-201ENST00000442790 549 ntBASIC15.19■□□□□ 0.02
HMGCLP35914 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.19■□□□□ 0.02
HMGCLP35914 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.19■□□□□ 0.02
HMGCLP35914 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 IGHV3-72-202ENST00000621503 303 ntBASIC15.19■□□□□ 0.02
HMGCLP35914 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.19■□□□□ 0.02
HMGCLP35914 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.19■□□□□ 0.02
HMGCLP35914 AC068587.6-202ENST00000641839 5619 ntBASIC15.19■□□□□ 0.02
HMGCLP35914 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.19■□□□□ 0.02
HMGCLP35914 AJ011931.1-201ENST00000618749 2492 ntBASIC15.19■□□□□ 0.02
HMGCLP35914 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HMGCLP35914 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGCLP35914 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HMGCLP35914 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HMGCLP35914 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMGCLP35914 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HMGCLP35914 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGCLP35914 LRRC59-203ENST00000576448 1531 ntBASIC15.18■□□□□ 0.02
HMGCLP35914 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.18■□□□□ 0.02
HMGCLP35914 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMGCLP35914 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGCLP35914 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
HMGCLP35914 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
HMGCLP35914 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGCLP35914 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGCLP35914 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HMGCLP35914 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGCLP35914 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HMGCLP35914 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
HMGCLP35914 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGCLP35914 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGCLP35914 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGCLP35914 AC005229.1-201ENST00000392885 409 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms