Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TM4SF1P30408 AC090616.6-203ENST00000579186 1945 ntBASIC18.62■□□□□ 0.57
TM4SF1P30408 AP005117.1-202ENST00000581724 1908 ntBASIC18.62■□□□□ 0.57
TM4SF1P30408 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF1P30408 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.62■□□□□ 0.57
TM4SF1P30408 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TM4SF1P30408 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
TM4SF1P30408 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TM4SF1P30408 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.62■□□□□ 0.57
TM4SF1P30408 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TM4SF1P30408 AC009560.1-201ENST00000620208 434 ntBASIC18.62■□□□□ 0.57
TM4SF1P30408 MIR6858-201ENST00000620733 67 ntBASIC18.62■□□□□ 0.57
TM4SF1P30408 AC127024.7-201ENST00000625101 200 ntBASIC18.62■□□□□ 0.57
TM4SF1P30408 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.62■□□□□ 0.57
TM4SF1P30408 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF1P30408 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF1P30408 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF1P30408 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF1P30408 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF1P30408 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.62■□□□□ 0.57
TM4SF1P30408 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF1P30408 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TM4SF1P30408 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.62■□□□□ 0.57
TM4SF1P30408 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.62■□□□□ 0.57
TM4SF1P30408 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.62■□□□□ 0.57
TM4SF1P30408 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.62■□□□□ 0.57
TM4SF1P30408 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF1P30408 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TM4SF1P30408 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF1P30408 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF1P30408 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF1P30408 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TM4SF1P30408 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TM4SF1P30408 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF1P30408 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.61■□□□□ 0.57
TM4SF1P30408 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.61■□□□□ 0.57
TM4SF1P30408 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TM4SF1P30408 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.61■□□□□ 0.57
TM4SF1P30408 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TM4SF1P30408 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TM4SF1P30408 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.61■□□□□ 0.57
TM4SF1P30408 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TM4SF1P30408 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.61■□□□□ 0.57
TM4SF1P30408 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 TLE1P1-201ENST00000422965 589 ntBASIC18.61■□□□□ 0.57
TM4SF1P30408 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 AC012362.1-201ENST00000434906 739 ntBASIC18.61■□□□□ 0.57
TM4SF1P30408 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC18.61■□□□□ 0.57
TM4SF1P30408 AP000358.1-201ENST00000456260 156 ntBASIC18.61■□□□□ 0.57
TM4SF1P30408 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TM4SF1P30408 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 AC141586.1-203ENST00000567242 366 ntBASIC18.61■□□□□ 0.57
TM4SF1P30408 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC18.61■□□□□ 0.57
TM4SF1P30408 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC18.61■□□□□ 0.57
TM4SF1P30408 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.61■□□□□ 0.57
TM4SF1P30408 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.61■□□□□ 0.57
TM4SF1P30408 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TM4SF1P30408 AL161773.1-201ENST00000624845 863 ntBASIC18.61■□□□□ 0.57
TM4SF1P30408 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.61■□□□□ 0.57
TM4SF1P30408 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TM4SF1P30408 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 PCDHB19P-201ENST00000570871 2371 ntBASIC18.61■□□□□ 0.57
TM4SF1P30408 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
TM4SF1P30408 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF1P30408 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.6■□□□□ 0.57
TM4SF1P30408 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.6■□□□□ 0.57
TM4SF1P30408 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.6■□□□□ 0.57
TM4SF1P30408 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TM4SF1P30408 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TM4SF1P30408 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 BANF1P3-201ENST00000412556 261 ntBASIC18.6■□□□□ 0.57
TM4SF1P30408 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 AL627422.1-201ENST00000434104 580 ntBASIC18.6■□□□□ 0.57
TM4SF1P30408 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.6■□□□□ 0.57
TM4SF1P30408 XBP1P1-201ENST00000436573 652 ntBASIC18.6■□□□□ 0.57
TM4SF1P30408 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC18.6■□□□□ 0.57
TM4SF1P30408 RPL18AP3-201ENST00000462885 528 ntBASIC18.6■□□□□ 0.57
TM4SF1P30408 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.6■□□□□ 0.57
TM4SF1P30408 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC18.6■□□□□ 0.57
TM4SF1P30408 MIR4522-201ENST00000584932 87 ntBASIC18.6■□□□□ 0.57
TM4SF1P30408 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms