Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.91□□□□□ -0.18
APEX1P27695 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
APEX1P27695 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.91□□□□□ -0.18
APEX1P27695 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.91□□□□□ -0.18
APEX1P27695 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.91□□□□□ -0.18
APEX1P27695 AC055876.3-201ENST00000431496 288 ntBASIC13.91□□□□□ -0.18
APEX1P27695 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.91□□□□□ -0.18
APEX1P27695 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.91□□□□□ -0.18
APEX1P27695 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.91□□□□□ -0.18
APEX1P27695 AL079307.3-201ENST00000556114 283 ntBASIC13.91□□□□□ -0.18
APEX1P27695 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.91□□□□□ -0.18
APEX1P27695 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.91□□□□□ -0.18
APEX1P27695 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.91□□□□□ -0.18
APEX1P27695 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.91□□□□□ -0.18
APEX1P27695 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.91□□□□□ -0.18
APEX1P27695 AL390955.2-201ENST00000603032 514 ntBASIC13.91□□□□□ -0.18
APEX1P27695 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.91□□□□□ -0.18
APEX1P27695 AC138649.4-201ENST00000612222 287 ntBASIC13.91□□□□□ -0.18
APEX1P27695 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.91□□□□□ -0.18
APEX1P27695 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.91□□□□□ -0.18
APEX1P27695 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
APEX1P27695 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
APEX1P27695 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
APEX1P27695 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.91□□□□□ -0.18
APEX1P27695 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APEX1P27695 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
APEX1P27695 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
APEX1P27695 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.91□□□□□ -0.18
APEX1P27695 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.91□□□□□ -0.18
APEX1P27695 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 AC027601.5-201ENST00000624065 2482 ntBASIC13.9□□□□□ -0.18
APEX1P27695 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.9□□□□□ -0.18
APEX1P27695 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
APEX1P27695 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
APEX1P27695 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.9□□□□□ -0.18
APEX1P27695 INTS4P1-203ENST00000641008 3683 ntBASIC13.9□□□□□ -0.18
APEX1P27695 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
APEX1P27695 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
APEX1P27695 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
APEX1P27695 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.9□□□□□ -0.18
APEX1P27695 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.9□□□□□ -0.18
APEX1P27695 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.9□□□□□ -0.18
APEX1P27695 AC069120.2-201ENST00000524091 540 ntBASIC13.9□□□□□ -0.18
APEX1P27695 AC140878.1-201ENST00000565277 250 ntBASIC13.9□□□□□ -0.18
APEX1P27695 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.9□□□□□ -0.18
APEX1P27695 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.9□□□□□ -0.18
APEX1P27695 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.9□□□□□ -0.18
APEX1P27695 SPDYE12P-201ENST00000618416 771 ntBASIC13.9□□□□□ -0.18
APEX1P27695 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
APEX1P27695 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
APEX1P27695 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.9□□□□□ -0.18
APEX1P27695 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 C8orf49-201ENST00000525043 1968 ntBASIC13.9□□□□□ -0.18
APEX1P27695 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.9□□□□□ -0.18
APEX1P27695 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.9□□□□□ -0.18
APEX1P27695 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.9□□□□□ -0.18
APEX1P27695 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APEX1P27695 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
APEX1P27695 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.9□□□□□ -0.19
APEX1P27695 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
APEX1P27695 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
APEX1P27695 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APEX1P27695 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APEX1P27695 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APEX1P27695 AC023024.2-201ENST00000623561 1993 ntBASIC13.89□□□□□ -0.19
APEX1P27695 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APEX1P27695 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
APEX1P27695 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms