Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMLP26374 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.4■□□□□ 0.54
CHMLP26374 AC004233.3-201ENST00000607794 1269 ntBASIC18.4■□□□□ 0.54
CHMLP26374 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CHMLP26374 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMLP26374 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHMLP26374 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMLP26374 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMLP26374 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMLP26374 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.4■□□□□ 0.54
CHMLP26374 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMLP26374 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CHMLP26374 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMLP26374 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMLP26374 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CHMLP26374 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CHMLP26374 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CHMLP26374 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CHMLP26374 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.54
CHMLP26374 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHMLP26374 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHMLP26374 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHMLP26374 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMLP26374 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CHMLP26374 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMLP26374 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMLP26374 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CHMLP26374 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMLP26374 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMLP26374 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMLP26374 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
CHMLP26374 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMLP26374 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMLP26374 AL139094.1-201ENST00000405549 1188 ntBASIC18.39■□□□□ 0.53
CHMLP26374 NUS1P3-201ENST00000423502 862 ntBASIC18.39■□□□□ 0.53
CHMLP26374 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMLP26374 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.39■□□□□ 0.53
CHMLP26374 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.39■□□□□ 0.53
CHMLP26374 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMLP26374 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMLP26374 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMLP26374 DUX4L47-201ENST00000566374 394 ntBASIC18.39■□□□□ 0.53
CHMLP26374 CTBP2P3-201ENST00000585629 1255 ntBASIC18.39■□□□□ 0.53
CHMLP26374 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMLP26374 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMLP26374 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
CHMLP26374 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMLP26374 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMLP26374 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMLP26374 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMLP26374 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMLP26374 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMLP26374 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMLP26374 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMLP26374 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMLP26374 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMLP26374 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMLP26374 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CHMLP26374 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHMLP26374 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMLP26374 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CHMLP26374 RNU1-114P-201ENST00000365297 166 ntBASIC18.38■□□□□ 0.53
CHMLP26374 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CHMLP26374 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CHMLP26374 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CHMLP26374 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMLP26374 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMLP26374 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMLP26374 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHMLP26374 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CHMLP26374 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMLP26374 AP001582.1-201ENST00000525856 295 ntBASIC18.38■□□□□ 0.53
CHMLP26374 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMLP26374 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.38■□□□□ 0.53
CHMLP26374 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.38■□□□□ 0.53
CHMLP26374 AC005252.2-201ENST00000624630 1141 ntBASIC18.38■□□□□ 0.53
CHMLP26374 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMLP26374 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHMLP26374 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CHMLP26374 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMLP26374 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMLP26374 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMLP26374 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CHMLP26374 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CHMLP26374 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CHMLP26374 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMLP26374 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMLP26374 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMLP26374 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMLP26374 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMLP26374 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CHMLP26374 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.37■□□□□ 0.53
CHMLP26374 AC087499.6-201ENST00000411576 835 ntBASIC18.37■□□□□ 0.53
CHMLP26374 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.37■□□□□ 0.53
CHMLP26374 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.37■□□□□ 0.53
CHMLP26374 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.37■□□□□ 0.53
CHMLP26374 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHMLP26374 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.37■□□□□ 0.53
CHMLP26374 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.37■□□□□ 0.53
CHMLP26374 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms