Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.79□□□□□ -0.04
CAPN3P20807 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 FO393414.2-201ENST00000405153 598 ntBASIC14.79□□□□□ -0.04
CAPN3P20807 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.79□□□□□ -0.04
CAPN3P20807 SPDYE17-201ENST00000412399 783 ntBASIC14.79□□□□□ -0.04
CAPN3P20807 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 AC074338.1-201ENST00000416825 156 ntBASIC14.79□□□□□ -0.04
CAPN3P20807 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.79□□□□□ -0.04
CAPN3P20807 SPDYE7P-202ENST00000420373 878 ntBASIC14.79□□□□□ -0.04
CAPN3P20807 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.79□□□□□ -0.04
CAPN3P20807 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CAPN3P20807 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.79□□□□□ -0.04
CAPN3P20807 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.79□□□□□ -0.04
CAPN3P20807 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.79□□□□□ -0.04
CAPN3P20807 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.79□□□□□ -0.04
CAPN3P20807 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CAPN3P20807 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.79□□□□□ -0.04
CAPN3P20807 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.79□□□□□ -0.04
CAPN3P20807 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.79□□□□□ -0.04
CAPN3P20807 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.79□□□□□ -0.04
CAPN3P20807 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
CAPN3P20807 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CAPN3P20807 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.78□□□□□ -0.04
CAPN3P20807 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.78□□□□□ -0.04
CAPN3P20807 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.78□□□□□ -0.04
CAPN3P20807 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CAPN3P20807 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CAPN3P20807 AL353705.2-201ENST00000428243 662 ntBASIC14.78□□□□□ -0.04
CAPN3P20807 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.78□□□□□ -0.04
CAPN3P20807 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.78□□□□□ -0.04
CAPN3P20807 AP005018.1-201ENST00000525475 301 ntBASIC14.78□□□□□ -0.04
CAPN3P20807 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.78□□□□□ -0.04
CAPN3P20807 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.78□□□□□ -0.04
CAPN3P20807 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.78□□□□□ -0.04
CAPN3P20807 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.78□□□□□ -0.04
CAPN3P20807 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CAPN3P20807 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CAPN3P20807 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CAPN3P20807 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CAPN3P20807 AC126755.1-201ENST00000525846 6405 ntBASIC14.78□□□□□ -0.04
CAPN3P20807 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CAPN3P20807 HSPA7-201ENST00000445535 1927 ntBASIC14.78□□□□□ -0.04
CAPN3P20807 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.78□□□□□ -0.04
CAPN3P20807 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.78□□□□□ -0.04
CAPN3P20807 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CAPN3P20807 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CAPN3P20807 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
CAPN3P20807 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN3P20807 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN3P20807 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CAPN3P20807 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.77□□□□□ -0.04
CAPN3P20807 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN3P20807 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.77□□□□□ -0.04
CAPN3P20807 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.77□□□□□ -0.04
CAPN3P20807 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.77□□□□□ -0.04
CAPN3P20807 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.77□□□□□ -0.04
CAPN3P20807 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CAPN3P20807 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN3P20807 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN3P20807 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN3P20807 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.77□□□□□ -0.04
CAPN3P20807 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CAPN3P20807 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN3P20807 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN3P20807 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN3P20807 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CAPN3P20807 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.77□□□□□ -0.05
CAPN3P20807 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms