Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC018442.1-201ENST00000421439 2061 ntBASIC13.48□□□□□ -0.25
ATF1P18846 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ATF1P18846 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ATF1P18846 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ATF1P18846 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 AC004461.1-201ENST00000412461 403 ntBASIC13.48□□□□□ -0.25
ATF1P18846 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.48□□□□□ -0.25
ATF1P18846 HIST3H2BA-201ENST00000436555 524 ntBASIC13.48□□□□□ -0.25
ATF1P18846 RBPMS2P1-201ENST00000437762 623 ntBASIC13.48□□□□□ -0.25
ATF1P18846 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.48□□□□□ -0.25
ATF1P18846 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.48□□□□□ -0.25
ATF1P18846 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.48□□□□□ -0.25
ATF1P18846 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.48□□□□□ -0.25
ATF1P18846 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.48□□□□□ -0.25
ATF1P18846 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.48□□□□□ -0.25
ATF1P18846 RN7SL828P-201ENST00000607615 303 ntBASIC13.48□□□□□ -0.25
ATF1P18846 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.48□□□□□ -0.25
ATF1P18846 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ATF1P18846 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
ATF1P18846 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.48□□□□□ -0.25
ATF1P18846 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ATF1P18846 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.48□□□□□ -0.25
ATF1P18846 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ATF1P18846 AC005252.3-201ENST00000623855 2258 ntBASIC13.48□□□□□ -0.25
ATF1P18846 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.48□□□□□ -0.25
ATF1P18846 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
ATF1P18846 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.48□□□□□ -0.25
ATF1P18846 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ATF1P18846 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.47□□□□□ -0.25
ATF1P18846 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ATF1P18846 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ATF1P18846 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ATF1P18846 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.47□□□□□ -0.25
ATF1P18846 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.47□□□□□ -0.25
ATF1P18846 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.47□□□□□ -0.25
ATF1P18846 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.47□□□□□ -0.25
ATF1P18846 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.47□□□□□ -0.25
ATF1P18846 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.47□□□□□ -0.25
ATF1P18846 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.47□□□□□ -0.25
ATF1P18846 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.47□□□□□ -0.25
ATF1P18846 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.47□□□□□ -0.25
ATF1P18846 AC093520.2-201ENST00000561830 333 ntBASIC13.47□□□□□ -0.25
ATF1P18846 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.47□□□□□ -0.25
ATF1P18846 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.47□□□□□ -0.25
ATF1P18846 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
ATF1P18846 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.47□□□□□ -0.25
ATF1P18846 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
ATF1P18846 AL133215.2-201ENST00000609242 977 ntBASIC13.47□□□□□ -0.25
ATF1P18846 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.47□□□□□ -0.25
ATF1P18846 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.47□□□□□ -0.25
ATF1P18846 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.47□□□□□ -0.25
ATF1P18846 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.47□□□□□ -0.25
ATF1P18846 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.47□□□□□ -0.25
ATF1P18846 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ATF1P18846 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ATF1P18846 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.47□□□□□ -0.25
ATF1P18846 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
ATF1P18846 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ATF1P18846 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATF1P18846 AL035456.1-201ENST00000456064 1369 ntBASIC13.46□□□□□ -0.25
ATF1P18846 KRT8P12-202ENST00000472924 1397 ntBASIC13.46□□□□□ -0.25
ATF1P18846 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATF1P18846 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms