Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.73■□□□□ 0.11
ERCC2P18074 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.73■□□□□ 0.11
ERCC2P18074 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.73■□□□□ 0.11
ERCC2P18074 AL162726.2-201ENST00000438986 1017 ntBASIC15.73■□□□□ 0.11
ERCC2P18074 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
ERCC2P18074 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 ENPP7P5-201ENST00000541031 1031 ntBASIC15.73■□□□□ 0.11
ERCC2P18074 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.73■□□□□ 0.11
ERCC2P18074 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 CLUHP6-201ENST00000580789 941 ntBASIC15.73■□□□□ 0.11
ERCC2P18074 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.73■□□□□ 0.11
ERCC2P18074 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.73■□□□□ 0.11
ERCC2P18074 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ERCC2P18074 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.73■□□□□ 0.11
ERCC2P18074 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.73■□□□□ 0.11
ERCC2P18074 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ERCC2P18074 AC023824.1-201ENST00000562945 2975 ntBASIC15.73■□□□□ 0.11
ERCC2P18074 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
ERCC2P18074 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ERCC2P18074 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.73■□□□□ 0.11
ERCC2P18074 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ERCC2P18074 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC2P18074 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC2P18074 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC2P18074 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ERCC2P18074 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ERCC2P18074 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.72■□□□□ 0.11
ERCC2P18074 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.72■□□□□ 0.11
ERCC2P18074 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC2P18074 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC2P18074 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ERCC2P18074 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.72■□□□□ 0.11
ERCC2P18074 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.72■□□□□ 0.11
ERCC2P18074 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC2P18074 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.72■□□□□ 0.11
ERCC2P18074 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ERCC2P18074 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.72■□□□□ 0.11
ERCC2P18074 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.72■□□□□ 0.11
ERCC2P18074 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.72■□□□□ 0.11
ERCC2P18074 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.72■□□□□ 0.11
ERCC2P18074 AC025048.6-201ENST00000634326 1161 ntBASIC15.72■□□□□ 0.11
ERCC2P18074 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.72■□□□□ 0.11
ERCC2P18074 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
ERCC2P18074 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC2P18074 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ERCC2P18074 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC2P18074 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
ERCC2P18074 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ERCC2P18074 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC2P18074 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC2P18074 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
ERCC2P18074 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.71■□□□□ 0.11
ERCC2P18074 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ERCC2P18074 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ERCC2P18074 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 CICP24-201ENST00000605464 2705 ntBASIC15.71■□□□□ 0.11
ERCC2P18074 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.71■□□□□ 0.11
ERCC2P18074 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 AC126755.1-201ENST00000525846 6405 ntBASIC15.71■□□□□ 0.11
ERCC2P18074 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ERCC2P18074 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 RNU1-114P-201ENST00000365297 166 ntBASIC15.71■□□□□ 0.11
ERCC2P18074 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.71■□□□□ 0.11
ERCC2P18074 AL139094.1-201ENST00000405549 1188 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms