Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.81■□□□□ 0.28
SMPD1P17405 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMPD1P17405 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SMPD1P17405 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.8■□□□□ 0.28
SMPD1P17405 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SMPD1P17405 AC007274.2-201ENST00000421675 662 ntBASIC16.8■□□□□ 0.28
SMPD1P17405 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 VDAC1P1-201ENST00000439229 848 ntBASIC16.8■□□□□ 0.28
SMPD1P17405 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.8■□□□□ 0.28
SMPD1P17405 MPRIPP1-201ENST00000452433 1089 ntBASIC16.8■□□□□ 0.28
SMPD1P17405 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.8■□□□□ 0.28
SMPD1P17405 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.8■□□□□ 0.28
SMPD1P17405 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.8■□□□□ 0.28
SMPD1P17405 AC132192.2-201ENST00000596206 1147 ntBASIC16.8■□□□□ 0.28
SMPD1P17405 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.8■□□□□ 0.28
SMPD1P17405 AL136295.7-201ENST00000619226 1200 ntBASIC16.8■□□□□ 0.28
SMPD1P17405 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 AC128714.1-201ENST00000637035 887 ntBASIC16.8■□□□□ 0.28
SMPD1P17405 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.8■□□□□ 0.28
SMPD1P17405 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.8■□□□□ 0.28
SMPD1P17405 AL365203.3-201ENST00000609742 2057 ntBASIC16.8■□□□□ 0.28
SMPD1P17405 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.8■□□□□ 0.28
SMPD1P17405 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SMPD1P17405 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
SMPD1P17405 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMPD1P17405 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.8■□□□□ 0.28
SMPD1P17405 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
SMPD1P17405 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
SMPD1P17405 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.79■□□□□ 0.28
SMPD1P17405 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.79■□□□□ 0.28
SMPD1P17405 AC244394.1-201ENST00000435000 1665 ntBASIC16.79■□□□□ 0.28
SMPD1P17405 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.79■□□□□ 0.28
SMPD1P17405 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.79■□□□□ 0.28
SMPD1P17405 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SMPD1P17405 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.79■□□□□ 0.28
SMPD1P17405 MIR33B-201ENST00000385104 96 ntBASIC16.79■□□□□ 0.28
SMPD1P17405 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SMPD1P17405 EEF1DP6-201ENST00000449232 372 ntBASIC16.79■□□□□ 0.28
SMPD1P17405 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SMPD1P17405 HLA-J-204ENST00000495278 958 ntBASIC16.79■□□□□ 0.28
SMPD1P17405 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.79■□□□□ 0.28
SMPD1P17405 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.79■□□□□ 0.28
SMPD1P17405 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.79■□□□□ 0.28
SMPD1P17405 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SMPD1P17405 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SMPD1P17405 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.79■□□□□ 0.28
SMPD1P17405 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.79■□□□□ 0.28
SMPD1P17405 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.79■□□□□ 0.28
SMPD1P17405 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.79■□□□□ 0.28
SMPD1P17405 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.79■□□□□ 0.28
SMPD1P17405 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.79■□□□□ 0.28
SMPD1P17405 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SMPD1P17405 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.79■□□□□ 0.28
SMPD1P17405 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMPD1P17405 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.79■□□□□ 0.28
SMPD1P17405 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SMPD1P17405 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMPD1P17405 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMPD1P17405 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMPD1P17405 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SMPD1P17405 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.78■□□□□ 0.28
SMPD1P17405 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.78■□□□□ 0.28
SMPD1P17405 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms