Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
DEFA4P12838 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
DEFA4P12838 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.54□□□□□ -0.4
DEFA4P12838 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
DEFA4P12838 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
DEFA4P12838 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
DEFA4P12838 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA4P12838 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
DEFA4P12838 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA4P12838 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.53□□□□□ -0.4
DEFA4P12838 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
DEFA4P12838 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA4P12838 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.53□□□□□ -0.4
DEFA4P12838 MTND6P24-201ENST00000440466 518 ntBASIC12.53□□□□□ -0.4
DEFA4P12838 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.53□□□□□ -0.4
DEFA4P12838 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA4P12838 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.53□□□□□ -0.4
DEFA4P12838 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
DEFA4P12838 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.53□□□□□ -0.4
DEFA4P12838 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.53□□□□□ -0.4
DEFA4P12838 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.53□□□□□ -0.4
DEFA4P12838 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA4P12838 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA4P12838 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA4P12838 KRT8P44-201ENST00000441609 1350 ntBASIC12.53□□□□□ -0.4
DEFA4P12838 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.53□□□□□ -0.4
DEFA4P12838 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
DEFA4P12838 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA4P12838 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.53□□□□□ -0.4
DEFA4P12838 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
DEFA4P12838 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA4P12838 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DEFA4P12838 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DEFA4P12838 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DEFA4P12838 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.52□□□□□ -0.4
DEFA4P12838 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DEFA4P12838 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DEFA4P12838 AC092053.3-201ENST00000641308 4975 ntBASIC12.52□□□□□ -0.4
DEFA4P12838 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DEFA4P12838 AC023024.2-201ENST00000623561 1993 ntBASIC12.52□□□□□ -0.4
DEFA4P12838 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DEFA4P12838 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
DEFA4P12838 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DEFA4P12838 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
DEFA4P12838 AC041040.2-201ENST00000622926 2899 ntBASIC12.52□□□□□ -0.4
DEFA4P12838 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
DEFA4P12838 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DEFA4P12838 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DEFA4P12838 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DEFA4P12838 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DEFA4P12838 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
DEFA4P12838 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
DEFA4P12838 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.52□□□□□ -0.41
DEFA4P12838 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 RPSAP43-201ENST00000402237 625 ntBASIC12.52□□□□□ -0.41
DEFA4P12838 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 SPDYE7P-202ENST00000420373 878 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms