Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.97■□□□□ 0.47
TOP1P11387 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.97■□□□□ 0.47
TOP1P11387 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 RNU1-114P-201ENST00000365297 166 ntBASIC17.97■□□□□ 0.47
TOP1P11387 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.97■□□□□ 0.47
TOP1P11387 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 AC244107.1-201ENST00000442033 332 ntBASIC17.97■□□□□ 0.47
TOP1P11387 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.97■□□□□ 0.47
TOP1P11387 AC114812.1-204ENST00000449669 728 ntBASIC17.97■□□□□ 0.47
TOP1P11387 AC022210.1-201ENST00000449856 793 ntBASIC17.97■□□□□ 0.47
TOP1P11387 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.97■□□□□ 0.47
TOP1P11387 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.97■□□□□ 0.47
TOP1P11387 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
TOP1P11387 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.97■□□□□ 0.47
TOP1P11387 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TOP1P11387 AL359881.2-201ENST00000602973 570 ntBASIC17.97■□□□□ 0.47
TOP1P11387 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.97■□□□□ 0.47
TOP1P11387 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.97■□□□□ 0.47
TOP1P11387 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 AC126755.1-201ENST00000525846 6405 ntBASIC17.97■□□□□ 0.47
TOP1P11387 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.97■□□□□ 0.47
TOP1P11387 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.97■□□□□ 0.47
TOP1P11387 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.97■□□□□ 0.47
TOP1P11387 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TOP1P11387 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TOP1P11387 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.96■□□□□ 0.47
TOP1P11387 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.96■□□□□ 0.47
TOP1P11387 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 LINC02228-204ENST00000642115 2962 ntBASIC17.96■□□□□ 0.47
TOP1P11387 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.96■□□□□ 0.47
TOP1P11387 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TOP1P11387 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 KLF2P2-201ENST00000416807 1039 ntBASIC17.96■□□□□ 0.47
TOP1P11387 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TOP1P11387 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.96■□□□□ 0.47
TOP1P11387 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.96■□□□□ 0.47
TOP1P11387 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TOP1P11387 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.96■□□□□ 0.47
TOP1P11387 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.96■□□□□ 0.47
TOP1P11387 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.96■□□□□ 0.47
TOP1P11387 MIR6805-201ENST00000615055 62 ntBASIC17.96■□□□□ 0.47
TOP1P11387 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.96■□□□□ 0.47
TOP1P11387 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.96■□□□□ 0.47
TOP1P11387 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.96■□□□□ 0.47
TOP1P11387 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.96■□□□□ 0.47
TOP1P11387 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.96■□□□□ 0.47
TOP1P11387 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TOP1P11387 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.96■□□□□ 0.47
TOP1P11387 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.96■□□□□ 0.47
TOP1P11387 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.96■□□□□ 0.47
TOP1P11387 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TOP1P11387 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TOP1P11387 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
TOP1P11387 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.95■□□□□ 0.46
TOP1P11387 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.95■□□□□ 0.46
TOP1P11387 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.95■□□□□ 0.46
TOP1P11387 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.95■□□□□ 0.46
TOP1P11387 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.95■□□□□ 0.46
TOP1P11387 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 AL158070.2-201ENST00000623713 1621 ntBASIC17.95■□□□□ 0.46
TOP1P11387 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms