Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.49□□□□□ -0.25
UBCP0CG48 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 AL589739.1-201ENST00000607720 493 ntBASIC13.49□□□□□ -0.25
UBCP0CG48 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.49□□□□□ -0.25
UBCP0CG48 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.49□□□□□ -0.25
UBCP0CG48 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
UBCP0CG48 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
UBCP0CG48 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.49□□□□□ -0.25
UBCP0CG48 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
UBCP0CG48 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
UBCP0CG48 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.49□□□□□ -0.25
UBCP0CG48 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.49□□□□□ -0.25
UBCP0CG48 BEND3P1-201ENST00000421591 1944 ntBASIC13.49□□□□□ -0.25
UBCP0CG48 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.49□□□□□ -0.25
UBCP0CG48 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.48□□□□□ -0.25
UBCP0CG48 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
UBCP0CG48 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.48□□□□□ -0.25
UBCP0CG48 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
UBCP0CG48 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.48□□□□□ -0.25
UBCP0CG48 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
UBCP0CG48 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
UBCP0CG48 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
UBCP0CG48 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
UBCP0CG48 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 AC074338.1-201ENST00000416825 156 ntBASIC13.48□□□□□ -0.25
UBCP0CG48 AC015922.1-201ENST00000421102 1152 ntBASIC13.48□□□□□ -0.25
UBCP0CG48 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.48□□□□□ -0.25
UBCP0CG48 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.48□□□□□ -0.25
UBCP0CG48 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
UBCP0CG48 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.48□□□□□ -0.25
UBCP0CG48 AC023141.5-201ENST00000458585 616 ntBASIC13.48□□□□□ -0.25
UBCP0CG48 KRT18P43-201ENST00000469825 1281 ntBASIC13.48□□□□□ -0.25
UBCP0CG48 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.48□□□□□ -0.25
UBCP0CG48 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.48□□□□□ -0.25
UBCP0CG48 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.48□□□□□ -0.25
UBCP0CG48 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.48□□□□□ -0.25
UBCP0CG48 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 AC079781.5-202ENST00000641784 3743 ntBASIC13.48□□□□□ -0.25
UBCP0CG48 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.48□□□□□ -0.25
UBCP0CG48 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.48□□□□□ -0.25
UBCP0CG48 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
UBCP0CG48 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.48□□□□□ -0.25
UBCP0CG48 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
UBCP0CG48 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBCP0CG48 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.47□□□□□ -0.25
UBCP0CG48 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
UBCP0CG48 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
UBCP0CG48 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.47□□□□□ -0.25
UBCP0CG48 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
UBCP0CG48 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.47□□□□□ -0.25
UBCP0CG48 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms