Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.01■□□□□ 0.15
RB1P06400 VDAC1P1-201ENST00000439229 848 ntBASIC16.01■□□□□ 0.15
RB1P06400 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.01■□□□□ 0.15
RB1P06400 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.01■□□□□ 0.15
RB1P06400 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
RB1P06400 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RB1P06400 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.01■□□□□ 0.15
RB1P06400 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.01■□□□□ 0.15
RB1P06400 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RB1P06400 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.01■□□□□ 0.15
RB1P06400 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 TBC1D3J-201ENST00000620719 1426 ntBASIC16.01■□□□□ 0.15
RB1P06400 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.01■□□□□ 0.15
RB1P06400 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RB1P06400 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.01■□□□□ 0.15
RB1P06400 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16■□□□□ 0.15
RB1P06400 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RB1P06400 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RB1P06400 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16■□□□□ 0.15
RB1P06400 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16■□□□□ 0.15
RB1P06400 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16■□□□□ 0.15
RB1P06400 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 AC239868.1-201ENST00000369385 493 ntBASIC16■□□□□ 0.15
RB1P06400 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16■□□□□ 0.15
RB1P06400 RPSAP31-201ENST00000416648 895 ntBASIC16■□□□□ 0.15
RB1P06400 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 RN7SL258P-201ENST00000478664 300 ntBASIC16■□□□□ 0.15
RB1P06400 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16■□□□□ 0.15
RB1P06400 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
RB1P06400 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16■□□□□ 0.15
RB1P06400 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 AC008805.1-201ENST00000590892 364 ntBASIC16■□□□□ 0.15
RB1P06400 AC132192.2-201ENST00000596206 1147 ntBASIC16■□□□□ 0.15
RB1P06400 AC103810.10-201ENST00000606504 343 ntBASIC16■□□□□ 0.15
RB1P06400 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16■□□□□ 0.15
RB1P06400 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 AC051619.9-201ENST00000623237 597 ntBASIC16■□□□□ 0.15
RB1P06400 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
RB1P06400 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RB1P06400 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
RB1P06400 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RB1P06400 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RB1P06400 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RB1P06400 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RB1P06400 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16■□□□□ 0.15
RB1P06400 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RB1P06400 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.99■□□□□ 0.15
RB1P06400 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RB1P06400 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.99■□□□□ 0.15
RB1P06400 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RB1P06400 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
RB1P06400 AL008718.2-201ENST00000609206 1313 ntBASIC15.99■□□□□ 0.15
RB1P06400 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RB1P06400 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RB1P06400 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RB1P06400 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RB1P06400 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RB1P06400 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RB1P06400 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RB1P06400 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RB1P06400 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RB1P06400 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RB1P06400 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RB1P06400 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RB1P06400 AL627231.1-201ENST00000394467 1125 ntBASIC15.99■□□□□ 0.15
RB1P06400 AL355334.1-201ENST00000417713 215 ntBASIC15.99■□□□□ 0.15
RB1P06400 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.99■□□□□ 0.15
RB1P06400 AC073150.1-201ENST00000450406 1084 ntBASIC15.99■□□□□ 0.15
RB1P06400 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RB1P06400 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RB1P06400 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.99■□□□□ 0.15
RB1P06400 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms