Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL596087.1-201ENST00000400979 1969 ntBASIC9.21□□□□□ -0.94
APOBP04114 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
APOBP04114 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 STK33-217ENST00000534493 1895 ntTSL 2 BASIC9.21□□□□□ -0.94
APOBP04114 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC9.21□□□□□ -0.94
APOBP04114 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 AC108724.1-201ENST00000481669 352 ntBASIC9.21□□□□□ -0.94
APOBP04114 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC9.21□□□□□ -0.94
APOBP04114 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
APOBP04114 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC9.21□□□□□ -0.94
APOBP04114 AC090510.3-201ENST00000615831 821 ntBASIC9.21□□□□□ -0.94
APOBP04114 AC233280.19-201ENST00000633223 136 ntBASIC9.21□□□□□ -0.94
APOBP04114 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
APOBP04114 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC9.21□□□□□ -0.94
APOBP04114 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
APOBP04114 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC9.21□□□□□ -0.94
APOBP04114 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC9.21□□□□□ -0.94
APOBP04114 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
APOBP04114 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC9.21□□□□□ -0.94
APOBP04114 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC9.21□□□□□ -0.94
APOBP04114 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 AC244197.1-201ENST00000456494 951 ntBASIC9.21□□□□□ -0.94
APOBP04114 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC9.21□□□□□ -0.94
APOBP04114 AC006116.2-201ENST00000589958 988 ntBASIC9.21□□□□□ -0.94
APOBP04114 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
APOBP04114 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC9.21□□□□□ -0.94
APOBP04114 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
APOBP04114 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 AP002353.1-201ENST00000528257 1599 ntBASIC9.2□□□□□ -0.94
APOBP04114 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
APOBP04114 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC9.2□□□□□ -0.94
APOBP04114 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC9.2□□□□□ -0.94
APOBP04114 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC9.2□□□□□ -0.94
APOBP04114 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
APOBP04114 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC9.2□□□□□ -0.94
APOBP04114 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 AC053503.3-201ENST00000448375 114 ntBASIC9.2□□□□□ -0.94
APOBP04114 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC9.2□□□□□ -0.94
APOBP04114 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC9.2□□□□□ -0.94
APOBP04114 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
APOBP04114 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC9.2□□□□□ -0.94
APOBP04114 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC9.2□□□□□ -0.94
APOBP04114 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
APOBP04114 NME4-203ENST00000397722 1232 ntTSL 2 BASIC9.2□□□□□ -0.94
APOBP04114 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC9.2□□□□□ -0.94
APOBP04114 AC113347.2-201ENST00000512350 279 ntBASIC9.2□□□□□ -0.94
APOBP04114 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC9.2□□□□□ -0.94
APOBP04114 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
APOBP04114 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC9.2□□□□□ -0.94
APOBP04114 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC9.2□□□□□ -0.94
APOBP04114 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
APOBP04114 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
APOBP04114 R3HDM2P2-201ENST00000401880 2116 ntBASIC9.2□□□□□ -0.94
APOBP04114 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC9.2□□□□□ -0.94
APOBP04114 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC9.2□□□□□ -0.94
APOBP04114 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC9.2□□□□□ -0.94
APOBP04114 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC9.2□□□□□ -0.94
APOBP04114 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC9.2□□□□□ -0.94
APOBP04114 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC9.2□□□□□ -0.94
APOBP04114 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC9.2□□□□□ -0.94
APOBP04114 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC9.2□□□□□ -0.94
APOBP04114 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC9.2□□□□□ -0.94
APOBP04114 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC9.2□□□□□ -0.94
APOBP04114 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
APOBP04114 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC9.2□□□□□ -0.94
APOBP04114 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC9.19□□□□□ -0.94
APOBP04114 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC9.19□□□□□ -0.94
APOBP04114 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
APOBP04114 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC9.19□□□□□ -0.94
APOBP04114 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
APOBP04114 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 AC018638.5-201ENST00000450885 754 ntBASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms