Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.86□□□□□ -0.35
SIX6O95475 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SIX6O95475 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.86□□□□□ -0.35
SIX6O95475 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.86□□□□□ -0.35
SIX6O95475 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SIX6O95475 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SIX6O95475 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.86□□□□□ -0.35
SIX6O95475 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SIX6O95475 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SIX6O95475 RPL5P21-201ENST00000404620 815 ntBASIC12.86□□□□□ -0.35
SIX6O95475 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SIX6O95475 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 KRT18P31-201ENST00000506277 1292 ntBASIC12.86□□□□□ -0.35
SIX6O95475 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.86□□□□□ -0.35
SIX6O95475 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.86□□□□□ -0.35
SIX6O95475 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.86□□□□□ -0.35
SIX6O95475 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.86□□□□□ -0.35
SIX6O95475 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.86□□□□□ -0.35
SIX6O95475 MTDHP3-201ENST00000594186 672 ntBASIC12.86□□□□□ -0.35
SIX6O95475 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.86□□□□□ -0.35
SIX6O95475 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.86□□□□□ -0.35
SIX6O95475 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.86□□□□□ -0.35
SIX6O95475 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
SIX6O95475 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.86□□□□□ -0.35
SIX6O95475 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 MIR497HG-202ENST00000572453 3838 ntBASIC12.86□□□□□ -0.35
SIX6O95475 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
SIX6O95475 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SIX6O95475 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
SIX6O95475 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.86□□□□□ -0.35
SIX6O95475 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.86□□□□□ -0.35
SIX6O95475 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.85□□□□□ -0.35
SIX6O95475 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SIX6O95475 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.85□□□□□ -0.35
SIX6O95475 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.85□□□□□ -0.35
SIX6O95475 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
SIX6O95475 AC133561.5-201ENST00000635547 218 ntBASIC12.85□□□□□ -0.35
SIX6O95475 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SIX6O95475 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SIX6O95475 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SIX6O95475 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SIX6O95475 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.85□□□□□ -0.35
SIX6O95475 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.85□□□□□ -0.35
SIX6O95475 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.85□□□□□ -0.35
SIX6O95475 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.85□□□□□ -0.35
SIX6O95475 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SIX6O95475 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.85□□□□□ -0.35
SIX6O95475 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SIX6O95475 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SIX6O95475 AC055811.4-201ENST00000624039 1754 ntBASIC12.84□□□□□ -0.35
SIX6O95475 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms