Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX4O95219 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX4O95219 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX4O95219 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX4O95219 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX4O95219 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.48□□□□□ -0.09
SNX4O95219 AC087499.6-201ENST00000411576 835 ntBASIC14.48□□□□□ -0.09
SNX4O95219 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.48□□□□□ -0.09
SNX4O95219 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.48□□□□□ -0.09
SNX4O95219 DFFBP1-201ENST00000433250 979 ntBASIC14.48□□□□□ -0.09
SNX4O95219 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX4O95219 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX4O95219 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX4O95219 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.48□□□□□ -0.09
SNX4O95219 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX4O95219 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.48□□□□□ -0.09
SNX4O95219 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SNX4O95219 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SNX4O95219 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX4O95219 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNX4O95219 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX4O95219 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX4O95219 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SNX4O95219 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX4O95219 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNX4O95219 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SNX4O95219 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SNX4O95219 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX4O95219 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SNX4O95219 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.48□□□□□ -0.09
SNX4O95219 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNX4O95219 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX4O95219 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
SNX4O95219 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX4O95219 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.47□□□□□ -0.09
SNX4O95219 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.47□□□□□ -0.09
SNX4O95219 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX4O95219 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SNX4O95219 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SNX4O95219 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
SNX4O95219 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SNX4O95219 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX4O95219 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.47□□□□□ -0.09
SNX4O95219 SPDYE19P-201ENST00000338590 713 ntBASIC14.47□□□□□ -0.09
SNX4O95219 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX4O95219 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.47□□□□□ -0.09
SNX4O95219 TARDBPP1-201ENST00000442013 1203 ntBASIC14.47□□□□□ -0.09
SNX4O95219 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.47□□□□□ -0.09
SNX4O95219 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.47□□□□□ -0.09
SNX4O95219 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 MEIS3P1-201ENST00000495167 958 ntBASIC14.47□□□□□ -0.09
SNX4O95219 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX4O95219 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.47□□□□□ -0.09
SNX4O95219 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SNX4O95219 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX4O95219 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.47□□□□□ -0.09
SNX4O95219 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.47□□□□□ -0.09
SNX4O95219 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
SNX4O95219 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX4O95219 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SNX4O95219 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.47□□□□□ -0.09
SNX4O95219 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX4O95219 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX4O95219 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX4O95219 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.46□□□□□ -0.09
SNX4O95219 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX4O95219 AC087481.3-201ENST00000602886 1894 ntBASIC14.46□□□□□ -0.09
SNX4O95219 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX4O95219 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX4O95219 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX4O95219 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SNX4O95219 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX4O95219 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
SNX4O95219 AC007541.1-201ENST00000570282 1469 ntBASIC14.46□□□□□ -0.09
SNX4O95219 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX4O95219 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.46□□□□□ -0.09
SNX4O95219 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.46□□□□□ -0.09
SNX4O95219 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX4O95219 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.46□□□□□ -0.09
SNX4O95219 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.46□□□□□ -0.09
SNX4O95219 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms