Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC19.74■□□□□ 0.75
LTN1O94822 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC19.74■□□□□ 0.75
LTN1O94822 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LTN1O94822 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.74■□□□□ 0.75
LTN1O94822 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LTN1O94822 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LTN1O94822 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LTN1O94822 FOS-204ENST00000554617 796 ntTSL 2 BASIC19.73■□□□□ 0.75
LTN1O94822 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC19.73■□□□□ 0.75
LTN1O94822 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC19.73■□□□□ 0.75
LTN1O94822 MIR4522-201ENST00000584932 87 ntBASIC19.73■□□□□ 0.75
LTN1O94822 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC19.73■□□□□ 0.75
LTN1O94822 AC005632.3-201ENST00000605544 308 ntBASIC19.73■□□□□ 0.75
LTN1O94822 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LTN1O94822 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC19.73■□□□□ 0.75
LTN1O94822 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC19.73■□□□□ 0.75
LTN1O94822 FAM90A2P-201ENST00000511144 1395 ntBASIC19.73■□□□□ 0.75
LTN1O94822 FAM90A25P-201ENST00000528404 1395 ntBASIC19.73■□□□□ 0.75
LTN1O94822 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LTN1O94822 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LTN1O94822 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LTN1O94822 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LTN1O94822 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LTN1O94822 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LTN1O94822 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LTN1O94822 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LTN1O94822 DUTP3-201ENST00000450025 415 ntBASIC19.72■□□□□ 0.75
LTN1O94822 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.72■□□□□ 0.75
LTN1O94822 AC027237.1-201ENST00000560942 655 ntBASIC19.72■□□□□ 0.75
LTN1O94822 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.72■□□□□ 0.75
LTN1O94822 WT1-AS_6.1-201ENST00000614919 121 ntBASIC19.72■□□□□ 0.75
LTN1O94822 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.72■□□□□ 0.75
LTN1O94822 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.72■□□□□ 0.75
LTN1O94822 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LTN1O94822 KRT18P9-201ENST00000604826 1300 ntBASIC19.72■□□□□ 0.75
LTN1O94822 AC074138.1-201ENST00000611182 1303 ntBASIC19.72■□□□□ 0.75
LTN1O94822 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.72■□□□□ 0.75
LTN1O94822 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 AL512430.1-201ENST00000392575 860 ntBASIC19.72■□□□□ 0.75
LTN1O94822 ST13P19-201ENST00000442505 1124 ntBASIC19.72■□□□□ 0.75
LTN1O94822 FTH1P22-201ENST00000456305 520 ntBASIC19.72■□□□□ 0.75
LTN1O94822 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC19.72■□□□□ 0.75
LTN1O94822 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC19.72■□□□□ 0.75
LTN1O94822 AC135983.4-201ENST00000564116 1262 ntBASIC19.72■□□□□ 0.75
LTN1O94822 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 STK26-204ENST00000481105 1835 ntTSL 2 BASIC19.72■□□□□ 0.75
LTN1O94822 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LTN1O94822 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
LTN1O94822 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.71■□□□□ 0.75
LTN1O94822 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LTN1O94822 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LTN1O94822 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 CELP-203ENST00000624767 2414 ntTSL 5 BASIC19.71■□□□□ 0.75
LTN1O94822 MIR557-201ENST00000385239 98 ntBASIC19.71■□□□□ 0.75
LTN1O94822 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC19.71■□□□□ 0.75
LTN1O94822 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.71■□□□□ 0.75
LTN1O94822 RPS9P1-201ENST00000419943 583 ntBASIC19.71■□□□□ 0.75
LTN1O94822 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC19.71■□□□□ 0.75
LTN1O94822 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC19.71■□□□□ 0.75
LTN1O94822 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC19.71■□□□□ 0.75
LTN1O94822 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC19.71■□□□□ 0.75
LTN1O94822 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC19.71■□□□□ 0.75
LTN1O94822 AC103691.2-201ENST00000618824 433 ntBASIC19.71■□□□□ 0.75
LTN1O94822 AC009145.4-201ENST00000625119 1294 ntBASIC19.71■□□□□ 0.75
LTN1O94822 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.71■□□□□ 0.75
LTN1O94822 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LTN1O94822 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.71■□□□□ 0.75
LTN1O94822 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC19.71■□□□□ 0.75
LTN1O94822 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LTN1O94822 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms