Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
PDCD6O75340 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PDCD6O75340 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.96□□□□□ -0.34
PDCD6O75340 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
PDCD6O75340 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.96□□□□□ -0.34
PDCD6O75340 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
PDCD6O75340 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PDCD6O75340 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.95□□□□□ -0.34
PDCD6O75340 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.95□□□□□ -0.34
PDCD6O75340 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
PDCD6O75340 AC018442.1-201ENST00000421439 2061 ntBASIC12.95□□□□□ -0.34
PDCD6O75340 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
PDCD6O75340 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.95□□□□□ -0.34
PDCD6O75340 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.95□□□□□ -0.34
PDCD6O75340 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
PDCD6O75340 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
PDCD6O75340 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.95□□□□□ -0.34
PDCD6O75340 CNN2P11-201ENST00000429351 262 ntBASIC12.95□□□□□ -0.34
PDCD6O75340 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.95□□□□□ -0.34
PDCD6O75340 SDHAP3-202ENST00000515467 728 ntBASIC12.95□□□□□ -0.34
PDCD6O75340 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.95□□□□□ -0.34
PDCD6O75340 AC051619.7-201ENST00000568314 623 ntBASIC12.95□□□□□ -0.34
PDCD6O75340 TEX28P1-201ENST00000613479 1221 ntBASIC12.95□□□□□ -0.34
PDCD6O75340 TEX28P2-201ENST00000617764 1221 ntBASIC12.95□□□□□ -0.34
PDCD6O75340 SPDYE12P-201ENST00000618416 771 ntBASIC12.95□□□□□ -0.34
PDCD6O75340 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.95□□□□□ -0.34
PDCD6O75340 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.95□□□□□ -0.34
PDCD6O75340 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.95□□□□□ -0.34
PDCD6O75340 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.95□□□□□ -0.34
PDCD6O75340 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
PDCD6O75340 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
PDCD6O75340 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.95□□□□□ -0.34
PDCD6O75340 AL359258.3-201ENST00000622910 2331 ntBASIC12.95□□□□□ -0.34
PDCD6O75340 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDCD6O75340 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PDCD6O75340 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
PDCD6O75340 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.95□□□□□ -0.34
PDCD6O75340 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PDCD6O75340 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
PDCD6O75340 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.94□□□□□ -0.34
PDCD6O75340 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
PDCD6O75340 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.94□□□□□ -0.34
PDCD6O75340 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.94□□□□□ -0.34
PDCD6O75340 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.94□□□□□ -0.34
PDCD6O75340 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PDCD6O75340 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.94□□□□□ -0.34
PDCD6O75340 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.94□□□□□ -0.34
PDCD6O75340 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.94□□□□□ -0.34
PDCD6O75340 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.94□□□□□ -0.34
PDCD6O75340 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.94□□□□□ -0.34
PDCD6O75340 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.94□□□□□ -0.34
PDCD6O75340 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.94□□□□□ -0.34
PDCD6O75340 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.94□□□□□ -0.34
PDCD6O75340 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.94□□□□□ -0.34
PDCD6O75340 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 AC010336.2-201ENST00000564226 506 ntBASIC12.94□□□□□ -0.34
PDCD6O75340 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 SAMD11P1-201ENST00000571429 661 ntBASIC12.94□□□□□ -0.34
PDCD6O75340 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
PDCD6O75340 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PDCD6O75340 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.94□□□□□ -0.34
PDCD6O75340 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.94□□□□□ -0.34
PDCD6O75340 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.94□□□□□ -0.34
PDCD6O75340 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.94□□□□□ -0.34
PDCD6O75340 AL109936.8-201ENST00000641772 604 ntBASIC12.94□□□□□ -0.34
PDCD6O75340 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDCD6O75340 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.94□□□□□ -0.34
PDCD6O75340 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms