Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.85■□□□□ 0.61
SMARCA5O60264 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SMARCA5O60264 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.85■□□□□ 0.61
SMARCA5O60264 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 SOCS2P1-201ENST00000417727 557 ntBASIC18.85■□□□□ 0.61
SMARCA5O60264 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCA5O60264 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.85■□□□□ 0.61
SMARCA5O60264 AP005018.1-201ENST00000525475 301 ntBASIC18.85■□□□□ 0.61
SMARCA5O60264 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCA5O60264 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.85■□□□□ 0.61
SMARCA5O60264 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SMARCA5O60264 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.85■□□□□ 0.61
SMARCA5O60264 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SMARCA5O60264 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 AC018529.2-202ENST00000611482 3087 ntBASIC18.85■□□□□ 0.61
SMARCA5O60264 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.84■□□□□ 0.61
SMARCA5O60264 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.84■□□□□ 0.61
SMARCA5O60264 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCA5O60264 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SMARCA5O60264 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SMARCA5O60264 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCA5O60264 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCA5O60264 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.84■□□□□ 0.61
SMARCA5O60264 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SMARCA5O60264 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.84■□□□□ 0.61
SMARCA5O60264 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SMARCA5O60264 BX539320.1-201ENST00000623759 877 ntBASIC18.84■□□□□ 0.61
SMARCA5O60264 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCA5O60264 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.84■□□□□ 0.61
SMARCA5O60264 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
SMARCA5O60264 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SMARCA5O60264 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SMARCA5O60264 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SMARCA5O60264 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SMARCA5O60264 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCA5O60264 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCA5O60264 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCA5O60264 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCA5O60264 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCA5O60264 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCA5O60264 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.83■□□□□ 0.61
SMARCA5O60264 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCA5O60264 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCA5O60264 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCA5O60264 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCA5O60264 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCA5O60264 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCA5O60264 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCA5O60264 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCA5O60264 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCA5O60264 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.83■□□□□ 0.6
SMARCA5O60264 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCA5O60264 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.83■□□□□ 0.6
SMARCA5O60264 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.83■□□□□ 0.6
SMARCA5O60264 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SMARCA5O60264 CU634019.7-201ENST00000624153 1185 ntBASIC18.83■□□□□ 0.6
SMARCA5O60264 FP236241.2-201ENST00000624906 1185 ntBASIC18.83■□□□□ 0.6
SMARCA5O60264 AC025048.6-201ENST00000634326 1161 ntBASIC18.83■□□□□ 0.6
SMARCA5O60264 AL033527.5-201ENST00000641382 801 ntBASIC18.83■□□□□ 0.6
SMARCA5O60264 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCA5O60264 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms