Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
EXTL3O43909 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EXTL3O43909 ACA64.2-201ENST00000459014 129 ntBASIC16.56■□□□□ 0.24
EXTL3O43909 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.56■□□□□ 0.24
EXTL3O43909 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.56■□□□□ 0.24
EXTL3O43909 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.56■□□□□ 0.24
EXTL3O43909 DUX4L47-201ENST00000566374 394 ntBASIC16.56■□□□□ 0.24
EXTL3O43909 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
EXTL3O43909 BTNL10-201ENST00000595971 695 ntBASIC16.56■□□□□ 0.24
EXTL3O43909 AC233724.13-201ENST00000598383 410 ntBASIC16.56■□□□□ 0.24
EXTL3O43909 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.56■□□□□ 0.24
EXTL3O43909 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
EXTL3O43909 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
EXTL3O43909 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
EXTL3O43909 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.56■□□□□ 0.24
EXTL3O43909 AL137783.1-201ENST00000623494 1896 ntBASIC16.56■□□□□ 0.24
EXTL3O43909 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.56■□□□□ 0.24
EXTL3O43909 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EXTL3O43909 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
EXTL3O43909 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
EXTL3O43909 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
EXTL3O43909 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
EXTL3O43909 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.56■□□□□ 0.24
EXTL3O43909 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.56■□□□□ 0.24
EXTL3O43909 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.56■□□□□ 0.24
EXTL3O43909 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EXTL3O43909 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
EXTL3O43909 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.56■□□□□ 0.24
EXTL3O43909 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EXTL3O43909 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
EXTL3O43909 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EXTL3O43909 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EXTL3O43909 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.55■□□□□ 0.24
EXTL3O43909 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.55■□□□□ 0.24
EXTL3O43909 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
EXTL3O43909 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
EXTL3O43909 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.55■□□□□ 0.24
EXTL3O43909 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.55■□□□□ 0.24
EXTL3O43909 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 AC112492.5-201ENST00000421897 457 ntBASIC16.55■□□□□ 0.24
EXTL3O43909 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.55■□□□□ 0.24
EXTL3O43909 EIF3FP3-201ENST00000434851 1086 ntBASIC16.55■□□□□ 0.24
EXTL3O43909 AL355864.2-201ENST00000447420 863 ntBASIC16.55■□□□□ 0.24
EXTL3O43909 AC106760.1-201ENST00000508690 800 ntBASIC16.55■□□□□ 0.24
EXTL3O43909 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.55■□□□□ 0.24
EXTL3O43909 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.55■□□□□ 0.24
EXTL3O43909 AL603764.1-201ENST00000636452 321 ntBASIC16.55■□□□□ 0.24
EXTL3O43909 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
EXTL3O43909 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.55■□□□□ 0.24
EXTL3O43909 LINC00528-201ENST00000600723 2160 ntBASIC16.55■□□□□ 0.24
EXTL3O43909 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.55■□□□□ 0.24
EXTL3O43909 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.55■□□□□ 0.24
EXTL3O43909 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.55■□□□□ 0.24
EXTL3O43909 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
EXTL3O43909 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.55■□□□□ 0.24
EXTL3O43909 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
EXTL3O43909 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
EXTL3O43909 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EXTL3O43909 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EXTL3O43909 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
EXTL3O43909 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EXTL3O43909 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
EXTL3O43909 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EXTL3O43909 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
EXTL3O43909 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EXTL3O43909 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EXTL3O43909 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EXTL3O43909 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EXTL3O43909 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
EXTL3O43909 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
EXTL3O43909 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
EXTL3O43909 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.54■□□□□ 0.24
EXTL3O43909 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
EXTL3O43909 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
EXTL3O43909 RPS2P32-201ENST00000439199 892 ntBASIC16.54■□□□□ 0.24
EXTL3O43909 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.54■□□□□ 0.24
EXTL3O43909 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.54■□□□□ 0.24
EXTL3O43909 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.54■□□□□ 0.24
EXTL3O43909 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms