Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNF13O43567 AC097493.3-201ENST00000509725 367 ntBASIC14□□□□□ -0.17
RNF13O43567 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14□□□□□ -0.17
RNF13O43567 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14□□□□□ -0.17
RNF13O43567 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RNF13O43567 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14□□□□□ -0.17
RNF13O43567 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14□□□□□ -0.17
RNF13O43567 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14□□□□□ -0.17
RNF13O43567 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14□□□□□ -0.17
RNF13O43567 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14□□□□□ -0.17
RNF13O43567 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14□□□□□ -0.17
RNF13O43567 LINC01115-203ENST00000606068 577 ntBASIC14□□□□□ -0.17
RNF13O43567 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14□□□□□ -0.17
RNF13O43567 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNF13O43567 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNF13O43567 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14□□□□□ -0.17
RNF13O43567 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
RNF13O43567 R3HDM2P2-201ENST00000401880 2116 ntBASIC14□□□□□ -0.17
RNF13O43567 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14□□□□□ -0.17
RNF13O43567 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14□□□□□ -0.17
RNF13O43567 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNF13O43567 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNF13O43567 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14□□□□□ -0.17
RNF13O43567 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RNF13O43567 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNF13O43567 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
RNF13O43567 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RNF13O43567 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNF13O43567 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RNF13O43567 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
RNF13O43567 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.99□□□□□ -0.17
RNF13O43567 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RNF13O43567 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RNF13O43567 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 CICP11-201ENST00000434745 2827 ntBASIC13.99□□□□□ -0.17
RNF13O43567 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RNF13O43567 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RNF13O43567 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.99□□□□□ -0.17
RNF13O43567 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.99□□□□□ -0.17
RNF13O43567 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.99□□□□□ -0.17
RNF13O43567 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.99□□□□□ -0.17
RNF13O43567 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.99□□□□□ -0.17
RNF13O43567 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.99□□□□□ -0.17
RNF13O43567 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
RNF13O43567 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.99□□□□□ -0.17
RNF13O43567 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.99□□□□□ -0.17
RNF13O43567 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
RNF13O43567 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 C8orf49-201ENST00000525043 1968 ntBASIC13.99□□□□□ -0.17
RNF13O43567 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.99□□□□□ -0.17
RNF13O43567 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RNF13O43567 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.99□□□□□ -0.17
RNF13O43567 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RNF13O43567 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 AC104581.4-201ENST00000623126 3052 ntBASIC13.99□□□□□ -0.17
RNF13O43567 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNF13O43567 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 AC100757.3-201ENST00000622361 1406 ntBASIC13.98□□□□□ -0.17
RNF13O43567 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RNF13O43567 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 AC140479.7-201ENST00000636301 2332 ntBASIC13.98□□□□□ -0.17
RNF13O43567 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.98□□□□□ -0.17
RNF13O43567 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RNF13O43567 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RNF13O43567 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RNF13O43567 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RNF13O43567 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms