Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCC4O15439 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCC4O15439 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCC4O15439 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCC4O15439 AC006001.1-201ENST00000325130 474 ntBASIC19.31■□□□□ 0.68
ABCC4O15439 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCC4O15439 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCC4O15439 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.31■□□□□ 0.68
ABCC4O15439 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCC4O15439 GOLGA2P4-201ENST00000441462 777 ntBASIC19.31■□□□□ 0.68
ABCC4O15439 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.31■□□□□ 0.68
ABCC4O15439 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCC4O15439 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.31■□□□□ 0.68
ABCC4O15439 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCC4O15439 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCC4O15439 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.31■□□□□ 0.68
ABCC4O15439 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.31■□□□□ 0.68
ABCC4O15439 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCC4O15439 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ABCC4O15439 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCC4O15439 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCC4O15439 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCC4O15439 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCC4O15439 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCC4O15439 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCC4O15439 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ABCC4O15439 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCC4O15439 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCC4O15439 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCC4O15439 AL138709.1-201ENST00000614840 1693 ntBASIC19.31■□□□□ 0.68
ABCC4O15439 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCC4O15439 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ABCC4O15439 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.3■□□□□ 0.68
ABCC4O15439 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.3■□□□□ 0.68
ABCC4O15439 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCC4O15439 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.3■□□□□ 0.68
ABCC4O15439 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.3■□□□□ 0.68
ABCC4O15439 AC006033.1-201ENST00000440505 426 ntBASIC19.3■□□□□ 0.68
ABCC4O15439 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC19.3■□□□□ 0.68
ABCC4O15439 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.3■□□□□ 0.68
ABCC4O15439 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCC4O15439 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ABCC4O15439 AC138951.2-201ENST00000623455 1161 ntBASIC19.3■□□□□ 0.68
ABCC4O15439 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ABCC4O15439 AC013726.1-201ENST00000563747 2285 ntBASIC19.3■□□□□ 0.68
ABCC4O15439 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCC4O15439 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ABCC4O15439 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCC4O15439 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCC4O15439 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ABCC4O15439 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCC4O15439 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ABCC4O15439 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ABCC4O15439 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.29■□□□□ 0.68
ABCC4O15439 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC19.29■□□□□ 0.68
ABCC4O15439 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ABCC4O15439 AC023310.1-201ENST00000554836 735 ntBASIC19.29■□□□□ 0.68
ABCC4O15439 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.29■□□□□ 0.68
ABCC4O15439 AL118558.3-201ENST00000607414 1079 ntBASIC19.29■□□□□ 0.68
ABCC4O15439 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.29■□□□□ 0.68
ABCC4O15439 AC145423.3-201ENST00000615987 467 ntBASIC19.29■□□□□ 0.68
ABCC4O15439 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCC4O15439 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC19.29■□□□□ 0.68
ABCC4O15439 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCC4O15439 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCC4O15439 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ABCC4O15439 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCC4O15439 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ABCC4O15439 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ABCC4O15439 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ABCC4O15439 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.29■□□□□ 0.68
ABCC4O15439 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.29■□□□□ 0.68
ABCC4O15439 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.29■□□□□ 0.68
ABCC4O15439 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ABCC4O15439 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCC4O15439 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCC4O15439 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.29■□□□□ 0.68
ABCC4O15439 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.29■□□□□ 0.68
ABCC4O15439 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.28■□□□□ 0.68
ABCC4O15439 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.28■□□□□ 0.68
ABCC4O15439 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ABCC4O15439 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.28■□□□□ 0.68
ABCC4O15439 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ABCC4O15439 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.28■□□□□ 0.68
ABCC4O15439 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms