Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN1O15353 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN1O15353 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN1O15353 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN1O15353 TOMM22P5-201ENST00000416399 439 ntBASIC18.21■□□□□ 0.51
FOXN1O15353 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN1O15353 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
FOXN1O15353 RN7SL596P-201ENST00000582123 288 ntBASIC18.21■□□□□ 0.51
FOXN1O15353 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXN1O15353 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC18.21■□□□□ 0.51
FOXN1O15353 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN1O15353 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
FOXN1O15353 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN1O15353 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXN1O15353 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXN1O15353 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXN1O15353 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN1O15353 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN1O15353 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN1O15353 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
FOXN1O15353 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXN1O15353 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN1O15353 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXN1O15353 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
FOXN1O15353 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
FOXN1O15353 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXN1O15353 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXN1O15353 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXN1O15353 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXN1O15353 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
FOXN1O15353 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.2■□□□□ 0.5
FOXN1O15353 AL139008.1-201ENST00000437894 228 ntBASIC18.2■□□□□ 0.5
FOXN1O15353 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC18.2■□□□□ 0.5
FOXN1O15353 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.2■□□□□ 0.5
FOXN1O15353 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.2■□□□□ 0.5
FOXN1O15353 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXN1O15353 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC18.2■□□□□ 0.5
FOXN1O15353 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXN1O15353 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXN1O15353 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXN1O15353 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXN1O15353 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXN1O15353 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
FOXN1O15353 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXN1O15353 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXN1O15353 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
FOXN1O15353 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.19■□□□□ 0.5
FOXN1O15353 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXN1O15353 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXN1O15353 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
FOXN1O15353 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
FOXN1O15353 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXN1O15353 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.19■□□□□ 0.5
FOXN1O15353 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
FOXN1O15353 CD8B2-202ENST00000417670 633 ntBASIC18.19■□□□□ 0.5
FOXN1O15353 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.19■□□□□ 0.5
FOXN1O15353 AC078991.1-201ENST00000437297 610 ntBASIC18.19■□□□□ 0.5
FOXN1O15353 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 AC106794.1-201ENST00000506935 792 ntBASIC18.19■□□□□ 0.5
FOXN1O15353 NSD1-211ENST00000511258 809 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXN1O15353 IGLV3-15-201ENST00000518356 244 ntBASIC18.19■□□□□ 0.5
FOXN1O15353 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXN1O15353 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXN1O15353 AL022344.2-201ENST00000568976 968 ntBASIC18.19■□□□□ 0.5
FOXN1O15353 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXN1O15353 AC100757.4-201ENST00000626934 759 ntBASIC18.19■□□□□ 0.5
FOXN1O15353 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
FOXN1O15353 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms