Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC25.41■■□□□ 1.66
CUX2O14529 AL596087.1-201ENST00000400979 1969 ntBASIC25.41■■□□□ 1.66
CUX2O14529 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC25.41■■□□□ 1.66
CUX2O14529 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 AL109809.1-201ENST00000418979 1367 ntBASIC25.41■■□□□ 1.66
CUX2O14529 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
CUX2O14529 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
CUX2O14529 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CUX2O14529 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC25.4■■□□□ 1.66
CUX2O14529 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC25.4■■□□□ 1.66
CUX2O14529 EEF1DP5-201ENST00000431410 772 ntBASIC25.4■■□□□ 1.66
CUX2O14529 GPX3-202ENST00000517973 612 ntTSL 3 BASIC25.4■■□□□ 1.66
CUX2O14529 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC25.4■■□□□ 1.66
CUX2O14529 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CUX2O14529 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
CUX2O14529 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
CUX2O14529 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CUX2O14529 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC25.4■■□□□ 1.66
CUX2O14529 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CUX2O14529 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CUX2O14529 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CUX2O14529 INE2-201ENST00000630399 1874 ntBASIC25.4■■□□□ 1.66
CUX2O14529 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CUX2O14529 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CUX2O14529 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC25.4■■□□□ 1.66
CUX2O14529 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CUX2O14529 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
CUX2O14529 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CUX2O14529 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CUX2O14529 AC226150.1-201ENST00000544259 466 ntBASIC25.4■■□□□ 1.66
CUX2O14529 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CUX2O14529 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CUX2O14529 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CUX2O14529 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
CUX2O14529 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC25.39■■□□□ 1.66
CUX2O14529 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CUX2O14529 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC25.39■■□□□ 1.66
CUX2O14529 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CUX2O14529 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC25.39■■□□□ 1.66
CUX2O14529 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC25.39■■□□□ 1.66
CUX2O14529 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
CUX2O14529 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CUX2O14529 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC25.39■■□□□ 1.65
CUX2O14529 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC25.39■■□□□ 1.65
CUX2O14529 BX088651.3-201ENST00000418155 352 ntBASIC25.39■■□□□ 1.65
CUX2O14529 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC25.39■■□□□ 1.65
CUX2O14529 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
CUX2O14529 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC25.39■■□□□ 1.65
CUX2O14529 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
CUX2O14529 AL118522.1-201ENST00000611368 560 ntBASIC25.39■■□□□ 1.65
CUX2O14529 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC25.39■■□□□ 1.65
CUX2O14529 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC25.39■■□□□ 1.65
CUX2O14529 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CUX2O14529 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC25.39■■□□□ 1.65
CUX2O14529 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CUX2O14529 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CUX2O14529 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
CUX2O14529 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CUX2O14529 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC25.38■■□□□ 1.65
CUX2O14529 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC25.38■■□□□ 1.65
CUX2O14529 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CUX2O14529 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC25.38■■□□□ 1.65
CUX2O14529 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CUX2O14529 ZBTB45P1-201ENST00000452761 1456 ntBASIC25.38■■□□□ 1.65
CUX2O14529 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC25.38■■□□□ 1.65
CUX2O14529 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CUX2O14529 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CUX2O14529 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CUX2O14529 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CUX2O14529 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
CUX2O14529 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CUX2O14529 KRT8P30-201ENST00000432100 650 ntBASIC25.38■■□□□ 1.65
CUX2O14529 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC25.38■■□□□ 1.65
CUX2O14529 RPS18P9-201ENST00000482817 460 ntBASIC25.38■■□□□ 1.65
CUX2O14529 CASP3-205ENST00000517513 964 ntTSL 5 BASIC25.38■■□□□ 1.65
CUX2O14529 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CUX2O14529 AC092862.1-201ENST00000541534 533 ntBASIC25.38■■□□□ 1.65
CUX2O14529 KNOP1P1-201ENST00000542108 989 ntBASIC25.38■■□□□ 1.65
CUX2O14529 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC25.38■■□□□ 1.65
CUX2O14529 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC25.38■■□□□ 1.65
CUX2O14529 AC006058.4-201ENST00000624016 1670 ntBASIC25.38■■□□□ 1.65
CUX2O14529 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC25.38■■□□□ 1.65
CUX2O14529 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CUX2O14529 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CUX2O14529 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CUX2O14529 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CUX2O14529 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms