Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.18■□□□□ 0.34
DDX39AO00148 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
DDX39AO00148 CSF2RBP1-201ENST00000447905 391 ntBASIC17.18■□□□□ 0.34
DDX39AO00148 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.18■□□□□ 0.34
DDX39AO00148 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
DDX39AO00148 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.18■□□□□ 0.34
DDX39AO00148 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.18■□□□□ 0.34
DDX39AO00148 ECM1P1-201ENST00000604092 1279 ntBASIC17.18■□□□□ 0.34
DDX39AO00148 AC138951.2-201ENST00000623455 1161 ntBASIC17.18■□□□□ 0.34
DDX39AO00148 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
DDX39AO00148 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX39AO00148 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX39AO00148 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
DDX39AO00148 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
DDX39AO00148 KRT8P14-201ENST00000414254 1442 ntBASIC17.18■□□□□ 0.34
DDX39AO00148 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
DDX39AO00148 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX39AO00148 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX39AO00148 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
DDX39AO00148 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 AL162727.3-201ENST00000635661 2787 ntBASIC17.17■□□□□ 0.34
DDX39AO00148 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
DDX39AO00148 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
DDX39AO00148 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.17■□□□□ 0.34
DDX39AO00148 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.17■□□□□ 0.34
DDX39AO00148 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
DDX39AO00148 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.17■□□□□ 0.34
DDX39AO00148 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.17■□□□□ 0.34
DDX39AO00148 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.17■□□□□ 0.34
DDX39AO00148 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
DDX39AO00148 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.17■□□□□ 0.34
DDX39AO00148 HLA-K-203ENST00000430151 1046 ntBASIC17.17■□□□□ 0.34
DDX39AO00148 EIF3FP3-201ENST00000434851 1086 ntBASIC17.17■□□□□ 0.34
DDX39AO00148 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.17■□□□□ 0.34
DDX39AO00148 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.17■□□□□ 0.34
DDX39AO00148 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.17■□□□□ 0.34
DDX39AO00148 AP000812.2-201ENST00000538934 718 ntBASIC17.17■□□□□ 0.34
DDX39AO00148 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.17■□□□□ 0.34
DDX39AO00148 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.17■□□□□ 0.34
DDX39AO00148 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.17■□□□□ 0.34
DDX39AO00148 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
DDX39AO00148 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.17■□□□□ 0.34
DDX39AO00148 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX39AO00148 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.16■□□□□ 0.34
DDX39AO00148 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.16■□□□□ 0.34
DDX39AO00148 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
DDX39AO00148 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.16■□□□□ 0.34
DDX39AO00148 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 AC138035.3-201ENST00000622706 2791 ntBASIC17.16■□□□□ 0.34
DDX39AO00148 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.16■□□□□ 0.34
DDX39AO00148 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.16■□□□□ 0.34
DDX39AO00148 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
DDX39AO00148 AL645937.2-201ENST00000396808 931 ntBASIC17.16■□□□□ 0.34
DDX39AO00148 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.16■□□□□ 0.34
DDX39AO00148 GHSR-202ENST00000427970 912 ntBASIC17.16■□□□□ 0.34
DDX39AO00148 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.16■□□□□ 0.34
DDX39AO00148 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.16■□□□□ 0.34
DDX39AO00148 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.16■□□□□ 0.34
DDX39AO00148 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.16■□□□□ 0.34
DDX39AO00148 RHOXF1P1-202ENST00000635473 501 ntBASIC17.16■□□□□ 0.34
DDX39AO00148 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
DDX39AO00148 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.16■□□□□ 0.34
DDX39AO00148 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.16■□□□□ 0.34
DDX39AO00148 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
DDX39AO00148 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms